RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 WNK3Q9BYP7 1800 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 SEC16AO15027 2179 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 IZUMO1RA6ND01 250 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 GPR82Q96P67 336 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 TMEM106BQ9NUM4 274 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 LINC00114Q6XXX2 140 aa14.73□□□□□ -0.05
SYNPO-201ENST00000307662 ZNF71Q9NQZ8 489 aaPredicted RBP14.73□□□□□ -0.05
SYNPO-201ENST00000307662 CIRBPQ14011 172 aaKnown RBP14.72□□□□□ -0.05
SYNPO-201ENST00000307662 FAM131CQ96AQ9 280 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 PARP14Q460N5 1801 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 MYO16Q9Y6X6 1858 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 PATE3B3GLJ2 98 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 IGKV3-11P04433 115 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 ADMP35318 185 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 H0YIZ8 118 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 SAPCD1Q5SSQ6 148 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 SCARF2Q96GP6 870 aaPredicted RBP14.72□□□□□ -0.05
SYNPO-201ENST00000307662 SPSB2Q99619 263 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 COLCA2A8K830 154 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 PEX7O00628 323 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 SAMD13Q5VXD3 122 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 ZNF441Q8N8Z8 693 aa14.72□□□□□ -0.05
SYNPO-201ENST00000307662 PSMG4Q5JS54 123 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 JKAMPQ9P055 326 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 DICER1Q9UPY3 1922 aaKnown RBP14.71□□□□□ -0.05
SYNPO-201ENST00000307662 hCG_38984A0A1B0GV85 526 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 TSPAN13O95857 204 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 MEF2CQ06413 473 aaPredicted RBP14.71□□□□□ -0.05
SYNPO-201ENST00000307662 C1orf185Q5T7R7 199 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 PMS2CLQ68D20 193 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 HIST1H2BLQ99880 126 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 DERL1Q9BUN8 251 aa14.71□□□□□ -0.05
SYNPO-201ENST00000307662 TMEM186Q96B77 213 aa14.71□□□□□ -0.06
SYNPO-201ENST00000307662 C18orf15Q96N68 181 aa14.71□□□□□ -0.06
SYNPO-201ENST00000307662 IGKV1D-43A0A0B4J1Z2 117 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 MOSP00540 346 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 IGFBP2P18065 325 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 ZNF418Q8TF45 676 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 RPP21Q9H633 154 aaKnown RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 BEX4Q9NWD9 120 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 FOXD3Q9UJU5 478 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 FAM106CPP0CH98 169 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 STAG3L3P0CL85 134 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 MPZP25189 248 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 TCF23Q7RTU1 214 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 DYNLRB2Q8TF09 96 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 IFI27L2Q9H2X8 130 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 XIRP1Q702N8 1843 aaKnown RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 CD5P06127 495 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 FBLN7Q53RD9 439 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 GPR6P46095 362 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-201ENST00000307662 A0A1B0GUT8 65 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 PRR33A8MZF0 331 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 NBEAP1P0C6P0 100 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 RPL39P5Q59GN2 51 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 HIST3H2BBQ8N257 126 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 NEUROG3Q9Y4Z2 214 aa14.7□□□□□ -0.06
SYNPO-201ENST00000307662 J3QW42 95 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 GPR183P32249 361 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 KIR2DL4Q99706 377 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 J3QRE1 110 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 IGHV3-48P01763 117 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 WNT9BO14905 357 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 RAB9AP51151 201 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 OR9G1Q8NH87 305 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
SYNPO-201ENST00000307662 A0A1B0GW15 77 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 C12orf77C9JDV5 145 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 CA1P00915 261 aaPredicted RBP14.69□□□□□ -0.06
SYNPO-201ENST00000307662 UNQ5815/PRO19632Q6UWF5 114 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 C5orf30Q96GV9 206 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 FMC1Q96HJ9 113 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 FBLN5Q9UBX5 448 aa14.69□□□□□ -0.06
SYNPO-201ENST00000307662 C17orf98A8MV24 154 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 ATP5LO75964 103 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 FAM169BQ8N8A8 192 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 LINC00470Q9BZP3 86 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 UBTD1Q9HAC8 227 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 PROB1E7EW31 1015 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 H3BUT2 72 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 NDUFA2O43678 99 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 SYNGR3O43761 229 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 RNFT1Q5M7Z0 435 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 C10orf126Q8N4M7 172 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 KLRB1Q12918 225 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 PEAR1Q5VY43 1037 aaPredicted RBP14.68□□□□□ -0.06
SYNPO-201ENST00000307662 C1QL4Q86Z23 238 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 REG4Q9BYZ8 158 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 UBE2L6O14933 153 aa14.68□□□□□ -0.06
SYNPO-201ENST00000307662 HS3ST3B1Q9Y662 390 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 TRAV9-2A0A087WT02 112 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 ATXN7O15265 892 aaPredicted RBP14.67□□□□□ -0.06
SYNPO-201ENST00000307662 C1QTNF9P0C862 333 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 TFPI2P48307 235 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 GCSAMLQ5JQS6 135 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 VCX2Q9H322 139 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 PAPPA-AS1Q5QFB9 102 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 SLC25A45Q8N413 288 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 AHRRA9YTQ3 701 aa14.67□□□□□ -0.06
SYNPO-201ENST00000307662 IFNL4K9M1U5 179 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms