RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 A0A0G2JMM0 328 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 A0A1W2PPB8 328 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 A0A1W2PRS3 328 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 KIR3DP1A8MWS1 328 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 IL6RP08887 468 aaPredicted RBP10.75□□□□□ -0.69
USP38-201ENST00000307017 PDLIM4P50479 330 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 SRSF4Q08170 494 aaKnown RBP10.75□□□□□ -0.69
USP38-201ENST00000307017 DRAM1Q8N682 238 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 SCNM1Q9BWG6 230 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 SPCS1Q9Y6A9 102 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 NPIPB8E9PQR5 432 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 NPIPB9F8W1W9 429 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 LINC01387J3KSC0 135 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 NPIPB7O75200 414 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 TMEM155Q4W5P6 130 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 KLF14Q8TD94 323 aaPredicted RBP10.75□□□□□ -0.69
USP38-201ENST00000307017 FAM206AQ9NX38 181 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 RGPD3A6NKT7 1758 aaPredicted RBP10.75□□□□□ -0.69
USP38-201ENST00000307017 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
USP38-201ENST00000307017 SVILO95425 2214 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 SFTPCP11686 197 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
USP38-201ENST00000307017 NHLRC3Q5JS37 347 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 UNQ9370/PRO34162Q6UXP9 181 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 LTBRP36941 435 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 LHBP01229 141 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 GPR183P32249 361 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 FBLN7Q53RD9 439 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 A0A1W2PQD3 144 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 SCAND1P57086 179 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 SAMD13Q5VXD3 122 aa10.74□□□□□ -0.69
USP38-201ENST00000307017 MAJINQ3KP22 176 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 IGKV1D-33P01593 117 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 IGKV1-33P01594 117 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 LIMS1P48059 325 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
USP38-201ENST00000307017 TRBV5-3A0A0A0MS03 114 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 C17orf98A8MV24 154 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 CRIM1Q9NZV1 1036 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 TMEM171Q8WVE6 324 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
USP38-201ENST00000307017 SF3B5Q9BWJ5 86 aaKnown RBP10.73□□□□□ -0.69
USP38-201ENST00000307017 LYNX1G3V0Z9 82 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 CEACAM4O75871 244 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 CLPSP04118 112 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 RFPL3SP0C7P2 107 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 LYNX1P0DP58 116 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
USP38-201ENST00000307017 FAM89BQ8N5H3 189 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 OR13A1Q8NGR1 328 aa10.73□□□□□ -0.69
USP38-201ENST00000307017 DANCRP0C864 163 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 TDGF1P13385 188 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 G6PC2Q9NQR9 355 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 DLEC1Q9Y238 1755 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 C8orf88P0DMB2 117 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 ASPHD1Q5U4P2 390 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 CLEC2AQ6UVW9 174 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 ZNF837Q96EG3 531 aaPredicted RBP10.72□□□□□ -0.69
USP38-201ENST00000307017 CCL19Q99731 98 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 RAMP3O60896 148 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 ZNF708P17019 499 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 SMAGPQ0VAQ4 97 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 SERF1AO75920 110 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 NIT1Q86X76 327 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 SSC4DQ8WTU2 575 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 TRGV3P03979 118 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 PRTN3P24158 256 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 EFNB1P98172 346 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 TRA2AQ13595 282 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP38-201ENST00000307017 INO80CQ6PI98 192 aaPredicted RBP10.72□□□□□ -0.69
USP38-201ENST00000307017 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 MS4A5Q9H3V2 200 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 A0A1W2PQF6 199 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 ODAMA1E959 279 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 JOSD1Q15040 202 aaPredicted RBP10.72□□□□□ -0.69
USP38-201ENST00000307017 DIRC2Q96SL1 478 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
USP38-201ENST00000307017 IGKV1D-42A0A075B6H8 117 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 CLPSL1A2RUU4 121 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 RPRMQ9NS64 109 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 VKORC1Q9BQB6 163 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 GP6Q9HCN6 339 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 PSCAO43653 123 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 RTN4RL2Q86UN3 420 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms