RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MOSP00540 346 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 CFDP00746 253 aaPredicted RBP14.09□□□□□ -0.15
KRT28-201ENST00000306658 IGHV1-69P01742 117 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 TPT1P13693 172 aaKnown RBP14.09□□□□□ -0.15
KRT28-201ENST00000306658 STOML3Q8TAV4 291 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 ENY2Q9NPA8 101 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 HEYLQ9NQ87 328 aaPredicted RBP14.09□□□□□ -0.15
KRT28-201ENST00000306658 UBQLN2Q9UHD9 624 aa14.09□□□□□ -0.15
KRT28-201ENST00000306658 BORCS7-ASMTA0A0B4J1R7 106 aa14.08□□□□□ -0.16
KRT28-201ENST00000306658 HOXA1P49639 335 aaPredicted RBP14.08□□□□□ -0.16
KRT28-201ENST00000306658 EXOSC2Q13868 293 aaKnown RBP14.08□□□□□ -0.16
KRT28-201ENST00000306658 PSG5Q15238 335 aa14.08□□□□□ -0.16
KRT28-201ENST00000306658 DYNAPQ8N1N2 210 aa14.08□□□□□ -0.16
KRT28-201ENST00000306658 OR2T10Q8NGZ9 312 aa14.08□□□□□ -0.16
KRT28-201ENST00000306658 C17orf50Q8WW18 174 aa14.08□□□□□ -0.16
KRT28-201ENST00000306658 TET2Q6N021 2002 aaPredicted RBP14.08□□□□□ -0.16
KRT28-201ENST00000306658 TEX50A0A1B0GTY4 177 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 J3QLI3 93 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 IGKV1D-33P01593 117 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 IGKV1-33P01594 117 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 BRS3P32247 399 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 HBG1P69891 147 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 HBG2P69892 147 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 PRCDQ00LT1 54 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 HES1Q14469 280 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 RPL7L1Q6DKI1 246 aaKnown RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 TMEM14EPQ6UXP3 125 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 KRTAP1-3Q8IUG1 177 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 BAP18Q8IXM2 172 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 TMEM217Q8N7C4 229 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 OR1S2Q8NGQ3 325 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 OR5C1Q8NGR4 320 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 OR1L8Q8NGR8 309 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 PHYHIPLQ96FC7 376 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 BSCL2Q96G97 398 aaPredicted RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 TRAV40A0A0B4J280 105 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 SCAF4O95104 1147 aaKnown RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 TGFAP01135 160 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 METTL15P1P0C7V9 234 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 VDAC2P45880 294 aaPredicted RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 DYNLT3P51808 116 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 ZNF266Q14584 549 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 MMD2Q8IY49 270 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 MAPK1IP1LQ8NDC0 245 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 AJUBAQ96IF1 538 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 EAF1Q96JC9 268 aaPredicted RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 HINT2Q9BX68 163 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 ZNF430Q9H8G1 570 aaPredicted RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 PLEKHA3Q9HB20 300 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 METTL1Q9UBP6 276 aaKnown RBP14.07□□□□□ -0.16
KRT28-201ENST00000306658 SIGLEC9Q9Y336 463 aa14.07□□□□□ -0.16
KRT28-201ENST00000306658 UNC79Q9P2D8 2635 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 ACTL6BO94805 426 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 CRYGBP07316 175 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 PAX6P26367 422 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 CNTFRP26992 372 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 MAS1LP35410 378 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 MMDQ15546 238 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 TMEM249Q2WGJ8 235 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 ALKAL2Q6UX46 152 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 PPP1R27Q86WC6 154 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 UBAC2Q8NBM4 344 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 KIAA1456Q9P272 454 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 NBPF19A0A087WUL8 3843 aa14.06□□□□□ -0.16
KRT28-201ENST00000306658 RRHO14718 337 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 IFNA10P01566 189 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 OPN1MWP04001 364 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 FAM106CPP0CH98 169 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 OPN1MW2P0DN77 364 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 OPN1MW3P0DN78 364 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 MYOD1P15172 320 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 F2RL1P55085 397 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 EBI3Q14213 229 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 HNF4GQ14541 408 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 CLINT1Q14677 625 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 PRSS8Q16651 343 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 STPG2Q8N412 459 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 NPBQ8NG41 125 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 SCARB1Q8WTV0 552 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 OR4C12Q96R67 309 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 WFDC1Q9HC57 220 aa14.05□□□□□ -0.16
KRT28-201ENST00000306658 NBR2O15453 112 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 DFFBO76075 338 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 IGHV4-31P0DP07 118 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 CD24P25063 80 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 PLGLAQ15195 96 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 EIF5AL1Q6IS14 154 aaKnown RBP14.04□□□□□ -0.16
KRT28-201ENST00000306658 THNSL2Q86YJ6 484 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 OR10P1Q8NGE3 313 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 TPSG1Q9NRR2 321 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 NDUFA4L2Q9NRX3 87 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 CREBBPQ92793 2442 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 IGHV3OR16-10A0A075B7F0 116 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 A0A1W2PN81 502 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 CHRNA7P36544 502 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 PJVKQ0ZLH3 352 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 RUSC1-AS1Q66K80 236 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms