RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RBPJQ06330 500 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 DHRS13Q6UX07 377 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 Q6ZVH6 145 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 DUSP13Q9UII6 198 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
TRIM35-201ENST00000305364 MUC22E2RYF6 1773 aaPredicted RBP10.94□□□□□ -0.66
TRIM35-201ENST00000305364 RRHO14718 337 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 MT-CO3P00414 261 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 AMY1AP04745 511 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 FOXG1P55316 489 aaPredicted RBP10.93□□□□□ -0.66
TRIM35-201ENST00000305364 LINC00205P59089 165 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 OR1C1Q15619 314 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 ZADH2Q8N4Q0 377 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 NTF4P34130 210 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 SSTR5P35346 364 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 UBE2L3P68036 154 aaKnown RBP10.93□□□□□ -0.66
TRIM35-201ENST00000305364 FBLN7Q53RD9 439 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 OR2T6Q8NHC8 308 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 CRIM1Q9NZV1 1036 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 ATRXP46100 2492 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 TMPRSS2O15393 492 aa10.93□□□□□ -0.66
TRIM35-201ENST00000305364 IL6RP08887 468 aaPredicted RBP10.93□□□□□ -0.66
TRIM35-201ENST00000305364 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
TRIM35-201ENST00000305364 CHEK1O14757 476 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 COX6A1P12074 109 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
TRIM35-201ENST00000305364 MRPS11P82912 194 aaKnown RBP10.92□□□□□ -0.66
TRIM35-201ENST00000305364 RELBQ01201 579 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 NOTCH2Q04721 2471 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 HYPMO75409 117 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 OPRK1P41145 380 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF703Q9H7S9 590 aaPredicted RBP10.92□□□□□ -0.66
TRIM35-201ENST00000305364 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 FREM1Q5H8C1 2179 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 MDP1Q86V88 176 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 DEFB127Q9H1M4 99 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 WDR54Q9H977 334 aa10.92□□□□□ -0.66
TRIM35-201ENST00000305364 K7ERU9 68 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 CSN3P07498 182 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
TRIM35-201ENST00000305364 WNT9BO14905 357 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 CA1P00915 261 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-201ENST00000305364 STAG3L2P0CL84 134 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 STAG3L3P0CL85 134 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 MZT1Q08AG7 82 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF497Q6ZNH5 498 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF295-AS1Q8N0V1 137 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 TPPP3Q9BW30 176 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 GSX1Q9H4S2 264 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-201ENST00000305364 NUDT3O95989 172 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 SLC25A40Q8TBP6 338 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 TMEM191AQ9H0A3 160 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
TRIM35-201ENST00000305364 C2orf16Q68DN1 1984 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 MLNRO43193 412 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 FAM162BQ5T6X4 162 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 SPATA31B1PQ5VZV4 182 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 Q6ZSR3 168 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 YTHDF2Q9Y5A9 579 aaKnown RBP10.9□□□□□ -0.66
TRIM35-201ENST00000305364 COX7A2P2O60397 106 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 TFF1P04155 84 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 IGLC2P0DOY2 106 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 IGLC3P0DOY3 106 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 FAM53AQ6NSI3 398 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-201ENST00000305364 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 ORAOV1Q8WV07 137 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 DNASE2BQ8WZ79 361 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 TCF19Q9Y242 345 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 TDGF1P13385 188 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 TSPOP30536 169 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 GPR6P46095 362 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-201ENST00000305364 PRRX1P54821 245 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 MIR17HGQ75NE6 70 aa10.9□□□□□ -0.66
TRIM35-201ENST00000305364 RNASE8Q8TDE3 154 aaKnown RBP10.9□□□□□ -0.66
TRIM35-201ENST00000305364 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
TRIM35-201ENST00000305364 MAGEA5P43359 124 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 LHX2P50458 406 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 LGALS4P56470 323 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 GABRA6Q16445 453 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 LYG1Q8N1E2 194 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 TMEM45BQ96B21 275 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 OR2V2Q96R30 315 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 CHRDL1Q9BU40 450 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 CYC1P08574 325 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 TMEM144Q7Z5S9 345 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 POM121L2Q96KW2 1035 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 GGTLC1Q9BX51 225 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 LYZL6O75951 148 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms