RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PRRX1P54821 245 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 ACOT6Q3I5F7 207 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 SOHLH1Q5JUK2 328 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 FFAR4Q5NUL3 377 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 WDR25Q64LD2 544 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 RPP25LQ8N5L8 163 aaKnown RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 Q8N7P7 452 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 LY6G5BQ8NDX9 201 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 BEND2Q8NDZ0 799 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 TMEM167AQ8TBQ9 72 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 ITLN2Q8WWU7 325 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 P2RX4Q99571 388 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 ACTR3CQ9C0K3 210 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 SLC39A9Q9NUM3 307 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 TET2Q6N021 2002 aaPredicted RBP15.78■□□□□ 0.12
HOXC4-201ENST00000303406 TEX50A0A1B0GTY4 177 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 hCG_1809904A0A1W2PP81 198 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 A0A1W2PPE2 198 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 A0A1W2PR64 198 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 A0A1W2PRV1 198 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 IGKV1D-33P01593 117 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 IGKV1-33P01594 117 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 BCL2P10415 239 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 HAGHQ16775 308 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 LCN15Q6UWW0 184 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 OR10G9Q8NGN4 311 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 OR10G7Q8NGN6 311 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 SPTBN4Q9H254 2564 aa15.78■□□□□ 0.12
HOXC4-201ENST00000303406 SPTA1P02549 2419 aa15.77■□□□□ 0.12
HOXC4-201ENST00000303406 PPIAL4CA0A0B4J2A2 164 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 IGLV1-47P01700 117 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 IFNA4P05014 189 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 PPIAL4GP0DN37 164 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 PAX6P26367 422 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 OPRK1P41145 380 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 RPS16P62249 146 aaKnown RBP15.77■□□□□ 0.11
HOXC4-201ENST00000303406 RHEBQ15382 184 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 TMEM249Q2WGJ8 235 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 HLA-DRB5Q30154 266 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 BSXQ3C1V8 233 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 TREML4Q6UXN2 200 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 SSX7Q7RTT5 188 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 C17orf50Q8WW18 174 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 CHODLQ9H9P2 273 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 NPVFQ9HCQ7 196 aa15.77■□□□□ 0.11
HOXC4-201ENST00000303406 ANKHD1Q8IWZ3 2542 aaKnown RBP15.77■□□□□ 0.11
HOXC4-201ENST00000303406 IGHV2-26A0A0B4J1V2 119 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 SEC14L6B5MCN3 397 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 NUPL2O15504 423 aaKnown RBP15.76■□□□□ 0.11
HOXC4-201ENST00000303406 CYB5BO43169 146 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 SOD3P08294 240 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 LGALS7P47929 136 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 C2orf83Q53S99 150 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 RBMS3Q6XE24 437 aaKnown RBP15.76■□□□□ 0.11
HOXC4-201ENST00000303406 OR1L8Q8NGR8 309 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 CLEC7AQ9BXN2 247 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 SMCO4Q9NRQ5 59 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 AMMECR1Q9Y4X0 333 aaPredicted RBP15.76■□□□□ 0.11
HOXC4-201ENST00000303406 LSM4Q9Y4Z0 139 aaKnown RBP15.76■□□□□ 0.11
HOXC4-201ENST00000303406 ROS1P08922 2347 aa15.76■□□□□ 0.11
HOXC4-201ENST00000303406 PKDREJQ9NTG1 2253 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 CA2P00918 260 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 LIPFP07098 398 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 OR13C7P0DN81 318 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 RPL8P62917 257 aaKnown RBP15.75■□□□□ 0.11
HOXC4-201ENST00000303406 AVPI1Q5T686 147 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 RXFP4Q8TDU9 374 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 TUBA4BQ9H853 241 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 GNG13Q9P2W3 67 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 VAX2Q9UIW0 290 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 DOCK11Q5JSL3 2073 aa15.75■□□□□ 0.11
HOXC4-201ENST00000303406 A0A1W2PN81 502 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 IGLV2-23P01705 113 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 CHRNA7P36544 502 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 VMA21Q3ZAQ7 101 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 AWAT1Q58HT5 328 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 PATZ1Q9HBE1 687 aaKnown RBP15.74■□□□□ 0.11
HOXC4-201ENST00000303406 NDUFA4L2Q9NRX3 87 aa15.74■□□□□ 0.11
HOXC4-201ENST00000303406 LOC105371267A0A1B0GV96 52 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 REG1BP48304 166 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 TMEM88Q6PEY1 159 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 CBLN2Q8IUK8 224 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 COMMD5Q9GZQ3 224 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 SMCO3A2RU48 225 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 GNLYP22749 145 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 DIAPH2-AS1Q14236 149 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 MGST2Q99735 147 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 GGTLC1Q9BX51 225 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 MANBALQ9NQG1 85 aa15.73■□□□□ 0.11
HOXC4-201ENST00000303406 C7orf77A4D0Y5 90 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 BUB1B-PAK6H3BSN5 160 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 M0R1W7 72 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 MYOD1P15172 320 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 CDC34P49427 236 aaPredicted RBP15.72■□□□□ 0.11
HOXC4-201ENST00000303406 FGF8P55075 233 aaPredicted RBP15.72■□□□□ 0.11
HOXC4-201ENST00000303406 RAB31Q13636 194 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 ARSJQ5FYB0 599 aaPredicted RBP15.72■□□□□ 0.11
HOXC4-201ENST00000303406 FAM122CQ6P4D5 195 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 TEPPQ6URK8 271 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 TEX45Q8NA69 505 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms