RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 FOXRED2Q8IWF2 684 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 VSTM2AQ8TAG5 236 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 CHAC2Q8WUX2 184 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 AIFM2Q9BRQ8 373 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 QTRT1Q9BXR0 403 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 COA4Q9NYJ1 87 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 KIAA1456Q9P272 454 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 CACNG5Q9UF02 275 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 FOXA2Q9Y261 457 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 JMJD1CQ15652 2540 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 A0A1B0GU03 582 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 ST8SIA3O43173 380 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 AKR1C2P52895 323 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 CRIP2P52943 208 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 RPL15P61313 204 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 ERVK-16P61578 105 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 ID3Q02535 119 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 SRSF4Q08170 494 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 FCN2Q15485 313 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 CXorf66Q5JRM2 361 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 MMD2Q8IY49 270 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 UXS1Q8NBZ7 420 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 OR4D5Q8NGN0 318 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 WIPF2Q8TF74 440 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 JMJD8Q96S16 334 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 FAM103A1Q9BTL3 118 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 NDUFA4L2Q9NRX3 87 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 C2CD3Q4AC94 2353 aa7.46□□□□□ -1.21
RFX3-201ENST00000302303 TRIM77I1YAP6 450 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 ATP6V0E1O15342 81 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 OPN1MWP04001 364 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 IGF1P05019 195 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 OPN1MW2P0DN77 364 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 OPN1MW3P0DN78 364 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 PPIFP30405 207 aaKnown RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 MAS1LP35410 378 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 RRAS2P62070 204 aaPredicted RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 CFHR3Q02985 330 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 SMCO1Q147U7 214 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 FXYD3Q14802 87 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 OR10W1Q8NGF6 305 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 OR5M8Q8NGP6 311 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 SRSF12Q8WXF0 261 aaKnown RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 NOL4LQ96MY1 436 aaPredicted RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 C16orf95Q9H693 158 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
RFX3-201ENST00000302303 HSPB7Q9UBY9 170 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 LINC00527Q9UJ94 153 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 ZNF257Q9Y2Q1 563 aa7.46□□□□□ -1.22
RFX3-201ENST00000302303 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 HMX3A6NHT5 357 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 MSGN1A6NI15 193 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 G3V318 75 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 SOX15O60248 233 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 ATG12O94817 140 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 NDUFA7O95182 113 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 VDAC2P45880 294 aaPredicted RBP7.45□□□□□ -1.22
RFX3-201ENST00000302303 WT1-ASQ06250 92 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 PLGLAQ15195 96 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 TNXAQ16473 311 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 C10orf99Q6UWK7 81 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 ZBTB8BQ8NAP8 495 aaPredicted RBP7.45□□□□□ -1.22
RFX3-201ENST00000302303 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 SGMS2Q8NHU3 365 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 LINC01006Q8NI28 216 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 PRSS22Q9GZN4 317 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 NPFFR1Q9GZQ6 430 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 C11orf1Q9H5F2 150 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 PRNDQ9UKY0 176 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 OR51B2Q9Y5P1 312 aa7.45□□□□□ -1.22
RFX3-201ENST00000302303 INS-IGF2F8WCM5 200 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 G3V3Q6 166 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 GOSR2O14653 212 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 SSNA1O43805 119 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
RFX3-201ENST00000302303 SNAPC5O75971 98 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 NXPH3O95157 252 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 TMEM50AO95807 157 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 AREGP15514 252 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 RPL27AP46776 148 aaKnown RBP7.44□□□□□ -1.22
RFX3-201ENST00000302303 PAX9P55771 341 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 GNB1P62873 340 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 PRCDQ00LT1 54 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 TNFRSF9Q07011 255 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 IAH1Q2TAA2 248 aaPredicted RBP7.44□□□□□ -1.22
RFX3-201ENST00000302303 KRTAP24-1Q3LI83 254 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 SPINK9Q5DT21 86 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 C19orf35Q6ZS72 473 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 SLC35E3Q7Z769 313 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.44□□□□□ -1.22
RFX3-201ENST00000302303 OR5B3Q8NH48 314 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 OR4A16Q8NH70 328 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 TMEM170AQ8WVE7 144 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 ARPC1AQ92747 370 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms