RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 OR10P1Q8NGE3 313 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 OR4C13Q8NGP0 309 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 OR2G3Q8NGZ4 309 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 VSTM2AQ8TAG5 236 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 FLYWCH2Q96CP2 140 aaKnown RBP9.74□□□□□ -0.85
TPM3-202ENST00000302206 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 SH3BGRL3Q9H299 93 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 TIMM9Q9Y5J7 89 aa9.74□□□□□ -0.85
TPM3-202ENST00000302206 ARID1AO14497 2285 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 C15orf62A8K5M9 175 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 H7C2Y5 167 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 SHOXO15266 292 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 IGKV1-16P04430 117 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 LGALS7P47929 136 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 CAMLGP49069 296 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 SERF2P84101 59 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 Q6ZRG5 221 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 CENPVQ7Z7K6 275 aaPredicted RBP9.73□□□□□ -0.85
TPM3-202ENST00000302206 Q8N7P7 452 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 HARBI1Q96MB7 349 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 WDR61Q9GZS3 305 aaKnown RBP9.73□□□□□ -0.85
TPM3-202ENST00000302206 ONECUT1Q9UBC0 465 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 OR51B2Q9Y5P1 312 aa9.73□□□□□ -0.85
TPM3-202ENST00000302206 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
TPM3-202ENST00000302206 INS-IGF2F8WCM5 200 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 LY6LH3BQJ8 138 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 PRH1P02810 166 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
TPM3-202ENST00000302206 PRTN3P24158 256 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 PDLIM4P50479 330 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 RAB11AP62491 216 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 PRCDQ00LT1 54 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 TMEM182Q6ZP80 229 aaPredicted RBP9.72□□□□□ -0.85
TPM3-202ENST00000302206 LFNGQ8NES3 379 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 UNKLQ9H9P5 680 aaKnown RBP9.72□□□□□ -0.85
TPM3-202ENST00000302206 ENY2Q9NPA8 101 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 HEYLQ9NQ87 328 aaPredicted RBP9.72□□□□□ -0.85
TPM3-202ENST00000302206 UQCC1Q9NVA1 299 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 KPTNQ9Y664 436 aa9.72□□□□□ -0.85
TPM3-202ENST00000302206 BTBD17A6NE02 478 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 ENSAO43768 121 aaKnown RBP9.71□□□□□ -0.86
TPM3-202ENST00000302206 SOX15O60248 233 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 NDUFS7O75251 213 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 IGLV2-23P01705 113 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 SAA1P0DJI8 122 aaPredicted RBP9.71□□□□□ -0.86
TPM3-202ENST00000302206 MDKP21741 143 aaPredicted RBP9.71□□□□□ -0.86
TPM3-202ENST00000302206 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
TPM3-202ENST00000302206 VMA21Q3ZAQ7 101 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 AKR1C8PQ5T2L2 129 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 OR8G2PQ6IF36 304 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 OR4P4Q8NGL7 312 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 TAF15Q92804 592 aaKnown RBP eCLIP9.71□□□□□ -0.86
TPM3-202ENST00000302206 RNF5Q99942 180 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 MS4A7Q9GZW8 240 aaPredicted RBP9.71□□□□□ -0.86
TPM3-202ENST00000302206 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
TPM3-202ENST00000302206 ABCA4P78363 2273 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 A0A1B0GW64 132 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 ODF3BA8MYP8 253 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 FNDC10F2Z333 226 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 TSPAN15O95858 294 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 IFNA10P01566 189 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 HOXB4P17483 251 aaPredicted RBP9.7□□□□□ -0.86
TPM3-202ENST00000302206 REG1BP48304 166 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 KRTAP10-9P60411 292 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 RPS16P62249 146 aaKnown RBP9.7□□□□□ -0.86
TPM3-202ENST00000302206 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
TPM3-202ENST00000302206 DLK1P80370 383 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 RUNX1Q01196 453 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 SPINK9Q5DT21 86 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 CCDC28AQ8IWP9 274 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 PNKDQ8N490 385 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 BPIFCQ8NFQ6 507 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 INSIG2Q9Y5U4 225 aa9.7□□□□□ -0.86
TPM3-202ENST00000302206 NIPBLQ6KC79 2804 aaeCLIP9.69□□□□□ -0.866e-7■■■□□ 15
TPM3-202ENST00000302206 TRAV1-1A0A0B4J248 108 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 UBE2L5PA0A1B0GUS4 154 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 OOSP1A8MZH6 123 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 NDUFS8O00217 210 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 MPDU1O75352 247 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 IGHV4-39P01824 125 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 HBE1P02100 147 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 COX7A1P24310 79 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 NPY1RP25929 384 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 CEACAM3P40198 252 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 LMO4P61968 165 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 ARF6P62330 175 aa9.69□□□□□ -0.86
TPM3-202ENST00000302206 PAX2Q02962 417 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms