RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CIB3Q96Q77 187 aaPredicted RBP11.2□□□□□ -0.62
CTTN-201ENST00000301843 TAAR6Q96RI8 345 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 DSCAMO60469 2012 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 RELNP78509 3460 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 OR10J4P0C629 311 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 CECR9P0C854 216 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 CD59P13987 128 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 GNG10P50151 68 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 GABRA6Q16445 453 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 NOL4LQ96MY1 436 aaPredicted RBP11.2□□□□□ -0.62
CTTN-201ENST00000301843 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 PPIAL4AQ9Y536 164 aa11.2□□□□□ -0.62
CTTN-201ENST00000301843 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 SPINT2O43291 252 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 CD46P15529 392 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 PAX1P15863 534 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 PRDX2P32119 198 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 LINC00310P59036 64 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 MSMPQ1L6U9 139 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 MDS2Q8NDY4 140 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 RIF1Q5UIP0 2472 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 IGFBP2P18065 325 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 CCL11P51671 97 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 SPCS3P61009 180 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 RAB4BP61018 213 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 TMEM144Q7Z5S9 345 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 OR10G8Q8NGN5 311 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 MRPL37Q9BZE1 423 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 VENTXO95231 258 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 CA1P00915 261 aaPredicted RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 ZNF25P17030 456 aaPredicted RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 MIR17HGQ75NE6 70 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 LHFPL4Q7Z7J7 247 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 SNRNP40Q96DI7 357 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
CTTN-201ENST00000301843 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
CTTN-201ENST00000301843 C15orf65H3BRN8 121 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 PDE6DO43924 150 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 GFRA3O60609 400 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 IL6RP08887 468 aaPredicted RBP11.18□□□□□ -0.62
CTTN-201ENST00000301843 HOXC12P31275 282 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 MRPL18Q9H0U6 180 aaKnown RBP11.18□□□□□ -0.62
CTTN-201ENST00000301843 GCM1Q9NP62 436 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 TP53TG5Q9Y2B4 290 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 FCN1O00602 326 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 VWC2Q2TAL6 325 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 LRFN3Q9BTN0 628 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 OPN3Q9H1Y3 402 aaPredicted RBP11.18□□□□□ -0.62
CTTN-201ENST00000301843 TCF19Q9Y242 345 aa11.18□□□□□ -0.62
CTTN-201ENST00000301843 TYMSP04818 313 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 SP9P0CG40 484 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 PRB4P10163 310 aaPredicted RBP11.17□□□□□ -0.62
CTTN-201ENST00000301843 ERVFC1-1P60608 527 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 MORN2Q502X0 79 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 ZBTB34Q8NCN2 500 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 PARD6AQ9NPB6 346 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 KCNIP2Q9NS61 270 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.17□□□□□ -0.62
CTTN-201ENST00000301843 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 SPRY3O43610 288 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 CRYBB3P26998 211 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 TFPI2P48307 235 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 EFNB3Q15768 340 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 SMIM21Q3B7S5 101 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 C9orf106Q8NAJ2 232 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 CDX4O14627 284 aaPredicted RBP11.17□□□□□ -0.62
CTTN-201ENST00000301843 NKX2-8O15522 239 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 HPRT1P00492 218 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 STAG3L2P0CL84 134 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 STAG3L3P0CL85 134 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 GCHFRP30047 84 aa11.17□□□□□ -0.62
CTTN-201ENST00000301843 ZZEF1O43149 2961 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 CRISP2P16562 243 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 KRTDAPP60985 99 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 ERVK-16P61578 105 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 RELBQ01201 579 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
CTTN-201ENST00000301843 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 WDR31Q8NA23 367 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 S1PR3Q99500 378 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 CA2P00918 260 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 ZNF83P51522 516 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 PSG5Q15238 335 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
CTTN-201ENST00000301843 FAM214BQ7L5A3 538 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms