RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TEX29Q8N6K0 151 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM229BQ8NBD8 167 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 OR4B1Q8NGF8 309 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 NT5CQ8TCD5 201 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 ISL2Q96A47 359 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 SLC25A46Q96AG3 418 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 PGLYRP3Q96LB9 341 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 SFXN3Q9BWM7 321 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 C1RLQ9NZP8 487 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 CCDC167Q9P0B6 97 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 AK3Q9UIJ7 227 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 LSM4Q9Y4Z0 139 aaKnown RBP3.83□□□□□ -1.8
ZNF560-201ENST00000301480 WDFY3Q8IZQ1 3526 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TNRC6AQ8NDV7 1962 aaKnown RBP3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TRBV20-1A0A075B6N2 111 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 A0A0B4J2A0 478 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 ZNF732B4DXR9 585 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 XKRYO14609 159 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 ARPC2O15144 300 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 OR1I1O60431 355 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 CRLF1O75462 422 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 OR2A4O95047 310 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 HPXP02790 462 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 SLC25A6P12236 298 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 COX6B1P14854 86 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 CDK2P24941 298 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 CTRLP40313 264 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 NDUFV3P56181 108 aaKnown RBP3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TESK1Q15569 626 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 DEFB110Q30KQ9 67 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 Q6AWC8 147 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 MFSD12Q6NUT3 480 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 HIST1H2AAQ96QV6 131 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 OR2A7Q96R45 310 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 VKORC1Q9BQB6 163 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 VSIRQ9H7M9 311 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 PNRC2Q9NPJ4 139 aaKnown RBP3.83□□□□□ -1.8
ZNF560-201ENST00000301480 SHPKQ9UHJ6 478 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 CES1P1Q9UKY3 287 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 FUT9Q9Y231 359 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 NSG2Q9Y328 171 aa3.83□□□□□ -1.8
ZNF560-201ENST00000301480 TRGV10A0A0A0MS01 117 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR2M5A3KFT3 312 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR4C45A6NMZ5 311 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM178BH3BS89 294 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 APOA2P02652 100 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CT45A8P0DMV1 189 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CT45A9P0DMV2 189 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 LMO1P25800 156 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CDSNQ15517 529 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 ZNF141Q15928 474 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 PRR30Q53SZ7 412 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CT45A2Q5DJT8 189 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 Q5XG85 94 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 MOB3BQ86TA1 216 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 C17orf64Q86WR6 236 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 PRR26Q8N8Z3 221 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR5AK2Q8NH90 309 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 ITLN2Q8WWU7 325 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR4K3Q96R72 315 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 ADOQ96SZ5 270 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 RTBDNQ9BSG5 229 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM59Q9BXS4 323 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 WDR13Q9H1Z4 485 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 JPT2Q9H910 190 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM100Q9NV29 134 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 ZNF581Q9P0T4 197 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 KLF13Q9Y2Y9 288 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 KLF12Q9Y4X4 402 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 SHANK1Q9Y566 2161 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 PRRG2O14669 202 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 BCL2L11O43521 198 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 FOXS1O43638 330 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CLDN14O95500 239 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR2H2O95918 312 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 BTCP35070 178 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 UBE2NP61088 152 aaKnown RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 Q0VFX4 171 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 SPANXN3Q5MJ09 141 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 Q6ZUT4 128 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 GOLT1AQ6ZVE7 132 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 Q71RC1 249 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 C3orf56Q8N813 242 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CNIH3Q8TBE1 160 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 RNF128Q8TEB7 428 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMED6Q8WW62 240 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM54Q969K7 222 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 TMEM125Q96AQ2 219 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 ZNF471Q9BX82 626 aaPredicted RBP3.82□□□□□ -1.8
ZNF560-201ENST00000301480 SLC2A6Q9UGQ3 507 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 CELSR3Q9NYQ7 3312 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 DOPEY1Q5JWR5 2465 aa3.82□□□□□ -1.8
ZNF560-201ENST00000301480 USP9YO00507 2555 aaPredicted RBP3.81□□□□□ -1.8
ZNF560-201ENST00000301480 GGT3PA6NGU5 568 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms