RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 EGLN1Q9GZT9 426 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 PDE6DO43924 150 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 IGHV1-2P23083 117 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 SPCS3P61009 180 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
CASC4-201ENST00000299957 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 RNF24Q9Y225 148 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 OBSL1O75147 1896 aa11.17□□□□□ -0.62
CASC4-201ENST00000299957 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
CASC4-201ENST00000299957 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
CASC4-201ENST00000299957 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 TCF21O43680 179 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 SRIP30626 198 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 SUB1P53999 127 aaKnown RBP eCLIP11.16□□□□□ -0.62
CASC4-201ENST00000299957 LYPD6Q86Y78 171 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 STPG3Q8N7X2 389 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 PKIBQ9C010 78 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 RNASE7Q9H1E1 156 aaKnown RBP11.16□□□□□ -0.62
CASC4-201ENST00000299957 CBY3A6NI87 242 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 CEACAM18A8MTB9 384 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 M0R2Z0 102 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 HPRT1P00492 218 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 AMBPP02760 352 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 INO80CQ6PI98 192 aaPredicted RBP11.16□□□□□ -0.62
CASC4-201ENST00000299957 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
CASC4-201ENST00000299957 CHD3Q12873 2000 aaKnown RBP11.15□□□□□ -0.62
CASC4-201ENST00000299957 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 ZNF891A8MT65 544 aaPredicted RBP11.15□□□□□ -0.62
CASC4-201ENST00000299957 CA2P00918 260 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 LINC00869P0C866 280 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 IL3RAP26951 378 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 B3GALT5-AS1P59052 145 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 MUC15Q8N387 334 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 CFPP27918 469 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 TFPI2P48307 235 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 NUBP1P53384 320 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 FOXF2Q12947 444 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 IL15RAQ13261 267 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
CASC4-201ENST00000299957 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 ZNRD1Q9P1U0 126 aa11.15□□□□□ -0.62
CASC4-201ENST00000299957 IL18BPO95998 194 aa11.15□□□□□ -0.63
CASC4-201ENST00000299957 ADH4P08319 380 aa11.15□□□□□ -0.63
CASC4-201ENST00000299957 OR9G9P0C7N8 305 aa11.15□□□□□ -0.63
CASC4-201ENST00000299957 LYL1P12980 280 aa11.15□□□□□ -0.63
CASC4-201ENST00000299957 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.63
CASC4-201ENST00000299957 MMD2Q8IY49 270 aa11.15□□□□□ -0.63
CASC4-201ENST00000299957 BCL2L2Q92843 193 aaPredicted RBP11.15□□□□□ -0.63
CASC4-201ENST00000299957 C21orf140B9A014 251 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 NDUFB3O43676 98 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 SLC25A17O43808 307 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 CTAG1AP78358 180 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 C14orf144Q96I85 54 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 P2RX4Q99571 388 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 MGST3O14880 152 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 MOSP00540 346 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
CASC4-201ENST00000299957 FAM27E3Q08E93 113 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 MLANAQ16655 118 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 MIR17HGQ75NE6 70 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 SAP30LQ9HAJ7 183 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 DENND4AQ7Z401 1863 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 A6NNC1 897 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 NCBP2LA6PVI3 153 aaKnown RBP11.14□□□□□ -0.63
CASC4-201ENST00000299957 CEACAM1P13688 526 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 CCKARP32238 428 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 PTTG1IPP53801 180 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 PAX9P55771 341 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 FAM90A2PQ658T7 463 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
CASC4-201ENST00000299957 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
CASC4-201ENST00000299957 C20orf202A1L168 122 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 LINC00473A8K010 186 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 OR4A8P0C604 315 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 FCER1GP30273 86 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 RPL11P62913 178 aaKnown RBP11.13□□□□□ -0.63
CASC4-201ENST00000299957 ETFRF1Q6IPR1 90 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
CASC4-201ENST00000299957 OTOGLQ3ZCN5 2332 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 hADV38S2A0JD32 116 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 BPIFB3P59826 476 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 ZFP36L1Q07352 338 aaKnown RBP11.13□□□□□ -0.63
CASC4-201ENST00000299957 IBA57Q5T440 356 aaKnown RBP11.13□□□□□ -0.63
CASC4-201ENST00000299957 TMEM42Q69YG0 159 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms