RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 IGHMP01871 453 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 ZNF708P17019 499 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LHX2P50458 406 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 PRR31Q5SQ13 230 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 OR13A1Q8NGR1 328 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TMEM186Q96B77 213 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 DUX3Q96PT4 197 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SPSB2Q99619 263 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 HLA-DRB1P01911 266 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CECR9P0C854 216 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 ATP5G3P48201 142 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CACNG7P62955 275 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 PTGDSP41222 190 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
CHRFAM7A-201ENST00000299847 UBR3Q6ZT12 1888 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 MSGN1A6NI15 193 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SHISA3A0PJX4 238 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TGFBR3LH3BV60 316 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CTAG1AP78358 180 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 DDTP30046 118 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 GNG5P63218 68 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 ZCCHC24Q8N2G6 241 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 ARID1AO14497 2285 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 A0A087WV48 116 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A10PA6NDY2 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A18PA6NE21 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A16PA6NEW6 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A20PA6NIJ5 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A8PA6NJQ4 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A7PA6NKC0 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A22PA8MWA6 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TMEM14DPA8MWL7 114 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A12PA8MX19 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A5PA8MXJ8 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A23PA8MXZ1 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 C12orf77C9JDV5 145 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A15PP0C7V4 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A13PP0C7W8 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A14PP0C7W9 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM90A24PP0C7X0 464 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 RPS20P60866 119 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 PMCHL1Q16048 86 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LAIR2Q6ISS4 152 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CHCHD2Q9Y6H1 151 aaPredicted RBP11.48□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 NDUFA2O43678 99 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SAXO1Q8IYX7 474 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TCF24Q7RTU0 167 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 KIR3DL3Q8N743 410 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 ZNF703Q9H7S9 590 aaPredicted RBP11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 APOBEC3AP31941 199 aaPredicted RBP11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 HBBP68871 147 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 F5P12259 2224 aa11.47□□□□□ -0.57
CHRFAM7A-201ENST00000299847 K7ERU9 68 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SRD5A1P18405 259 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LYNX1G3V0Z9 82 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 LYNX1P0DP58 116 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
CHRFAM7A-201ENST00000299847 TUBGCP6Q96RT7 1819 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IGHV1-2P23083 117 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NHLRC3Q5JS37 347 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 Q6ZT83 130 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TNFRSF18Q9Y5U5 241 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 B9A039 149 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TSPOP30536 169 aa11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.58
CHRFAM7A-201ENST00000299847 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PPP1R27Q86WC6 154 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 LOXL4Q96JB6 756 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PRELID3AQ96N28 172 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PEX7O00628 323 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms