RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
UBAP1-201ENST00000297661 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 SH2D1BO14796 132 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 PDE6DO43924 150 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 SMPD2O60906 423 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 AGFG2O95081 481 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 G6PCP35575 357 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 LINC00596Q86U02 117 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 OR52L2PQ8NGH6 319 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 PLPPR2Q96GM1 343 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 PKD1L2Q7Z442 2459 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 F6UZH7 168 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.98□□□□□ -0.33
UBAP1-201ENST00000297661 MPV17P39210 176 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 ZNF90Q03938 601 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 AESQ08117 197 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 UNQ5815/PRO19632Q6UWF5 114 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 FGFRL1Q8N441 504 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 MDS2Q8NDY4 140 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 KLF13Q9Y2Y9 288 aaPredicted RBP12.98□□□□□ -0.33
UBAP1-201ENST00000297661 ATRXP46100 2492 aa12.98□□□□□ -0.33
UBAP1-201ENST00000297661 RP1L1Q8IWN7 2480 aaPredicted RBP12.98□□□□□ -0.33
UBAP1-201ENST00000297661 TRGV5A0A0B4J1U4 118 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 TOMM40O96008 361 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 ARG2P78540 354 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 TFF3Q07654 80 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 TRBV20OR9-2A0A075B6H5 130 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 C21orf140B9A014 251 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 NKX2-8O15522 239 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 GPX1P07203 203 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 RPL30P62888 115 aaKnown RBP12.97□□□□□ -0.33
UBAP1-201ENST00000297661 PSG7Q13046 419 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 C5orf30Q96GV9 206 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 OBP2BQ9NPH6 170 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 CLN8Q9UBY8 286 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 IGHV3-43A0A0B4J1X8 118 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 IGHV3-43DP0DP04 118 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 THBS3P49746 956 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 LTC4SQ16873 150 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 TBL2Q9Y4P3 447 aaKnown RBP12.97□□□□□ -0.33
UBAP1-201ENST00000297661 COX11Q9Y6N1 276 aa12.97□□□□□ -0.33
UBAP1-201ENST00000297661 LRP5LA4QPB2 252 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 DEFB108AA8MXU0 73 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 FCN1O00602 326 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 TIMP3P35625 211 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 CDC34P49427 236 aaPredicted RBP12.96□□□□□ -0.33
UBAP1-201ENST00000297661 HINT1P49773 126 aaPredicted RBP12.96□□□□□ -0.33
UBAP1-201ENST00000297661 Q0VG73 95 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 CNEP1R1Q8N9A8 125 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 RFESDQ8TAC1 157 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 NANOS1Q8WY41 292 aaKnown RBP12.96□□□□□ -0.33
UBAP1-201ENST00000297661 NPCDR1Q9BY65 106 aa12.96□□□□□ -0.33
UBAP1-201ENST00000297661 USP24Q9UPU5 2620 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 HAND1O96004 215 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 CD46P15529 392 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 ERVK11-1P61568 191 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 ZNF766Q5HY98 468 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 Q6ZR03 302 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 MRGPRDQ8TDS7 321 aa12.96□□□□□ -0.34
UBAP1-201ENST00000297661 LIN7CQ9NUP9 197 aaKnown RBP12.96□□□□□ -0.34
UBAP1-201ENST00000297661 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 IER3P46695 156 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 GSX1Q9H4S2 264 aaPredicted RBP12.95□□□□□ -0.34
UBAP1-201ENST00000297661 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 METRNQ9UJH8 293 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 ICE1Q9Y2F5 2266 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 C12orf77C9JDV5 145 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 KCNIP2Q9NS61 270 aa12.95□□□□□ -0.34
UBAP1-201ENST00000297661 MMP23AO75900 390 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 AMTP48728 403 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 DCTN5Q9BTE1 182 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 POLDIP2Q9Y2S7 368 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 CADP27708 2225 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 BSNQ9UPA5 3926 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 SNURFLB1AK76 121 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 SLC17A3O00476 420 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 ZNF253O75346 499 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 S1PR2O95136 353 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 IGHV3-13P01766 116 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 IGHV3-7P01780 117 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 SSTR5P35346 364 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 GABRA2P47869 451 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 SPACA3Q8IXA5 215 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 TRIB1Q96RU8 372 aa12.94□□□□□ -0.34
UBAP1-201ENST00000297661 C17orf98A8MV24 154 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 NPIPB11E5RHQ5 1161 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms