RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 OR2B11Q5JQS5 317 aa12.84□□□□□ -0.35
NPM1-201ENST00000296930 C18orf65Q6ZTR6 163 aa12.84□□□□□ -0.35
NPM1-201ENST00000296930 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
NPM1-201ENST00000296930 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
NPM1-201ENST00000296930 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
NPM1-201ENST00000296930 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
NPM1-201ENST00000296930 K7EIL1 84 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 IGKV1-39P01597 117 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 IGKV1D-39P04432 117 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 CT45A6P0DMU7 189 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 CT45A5P0DMU8 189 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 CT45A7P0DMV0 189 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
NPM1-201ENST00000296930 TMEM268Q5VZI3 342 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 TCTEX1D1Q8N7M0 179 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 SLC35G3Q8N808 338 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 P2RX4Q99571 388 aa12.83□□□□□ -0.36
NPM1-201ENST00000296930 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
NPM1-201ENST00000296930 FAM212BQ9NTI7 297 aaPredicted RBP12.83□□□□□ -0.36
NPM1-201ENST00000296930 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 SERPINE2P07093 398 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 HOXB5P09067 269 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 F2RL1P55085 397 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 KRTAP10-11P60412 298 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 FOXE3Q13461 319 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 SELENOHQ8IZQ5 122 aaKnown RBP12.82□□□□□ -0.36
NPM1-201ENST00000296930 RBPMSQ93062 196 aaKnown RBP12.82□□□□□ -0.36
NPM1-201ENST00000296930 IL22RA2Q969J5 263 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 WDR89Q96FK6 387 aaPredicted RBP12.82□□□□□ -0.36
NPM1-201ENST00000296930 ADTRPQ96IZ2 230 aa12.82□□□□□ -0.36
NPM1-201ENST00000296930 FYTTD1Q96QD9 318 aaKnown RBP12.82□□□□□ -0.36
NPM1-201ENST00000296930 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
NPM1-201ENST00000296930 OR2A4O95047 310 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 ELANEP08246 267 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 HOXD3P31249 432 aaPredicted RBP12.81□□□□□ -0.36
NPM1-201ENST00000296930 OR2A7Q96R45 310 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 FCGR3BO75015 233 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 RPLP1P05386 114 aaKnown RBP12.81□□□□□ -0.36
NPM1-201ENST00000296930 VDAC1P21796 283 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 GGNBP1Q5YKI7 109 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 RNF152Q8N8N0 203 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 PRELID3BQ9Y3B1 194 aa12.81□□□□□ -0.36
NPM1-201ENST00000296930 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 CCL24O00175 119 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■■□ 21.2
NPM1-201ENST00000296930 S1PR2O95136 353 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 IGF1P05019 195 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 RPA2P15927 270 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 LPAR6P43657 344 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
NPM1-201ENST00000296930 MMDQ15546 238 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 CD300LFQ8TDQ1 290 aa12.8□□□□□ -0.36
NPM1-201ENST00000296930 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
NPM1-201ENST00000296930 DUXBA0A1W2PPF3 345 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 IGHG4P01861 327 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
NPM1-201ENST00000296930 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 CFHR3Q02985 330 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 DEFB121Q5J5C9 76 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 OR5AN1Q8NGI8 311 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 RBMXL1Q96E39 390 aaKnown RBP12.79□□□□□ -0.36
NPM1-201ENST00000296930 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 COL7A1Q02388 2944 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 A0A0G2JRQ6 117 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 C5orf51A6NDU8 294 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 FAM25EA8MYX2 175 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 H0YJW9 148 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 IGKV1-5P01602 117 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 GSG1LQ6UXU4 331 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 LCNL1Q6ZST4 164 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 DUX3Q96PT4 197 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
NPM1-201ENST00000296930 C13orf42A0A1B0GVH6 325 aa12.78□□□□□ -0.36
NPM1-201ENST00000296930 IFNA21P01568 189 aa12.78□□□□□ -0.36
NPM1-201ENST00000296930 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
NPM1-201ENST00000296930 PLEKHA2Q9HB19 425 aa12.78□□□□□ -0.36
NPM1-201ENST00000296930 PIGBOS1A0A0B4J2F0 54 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 G3V3Q6 166 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 CRYZL1O95825 349 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 HPRT1P00492 218 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 IGKV1-16P04430 117 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 RAP2BP61225 183 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.36
NPM1-201ENST00000296930 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 NBR2O15453 112 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 HLA-DRB1P01911 266 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 APOA2P02652 100 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 P0C879 139 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 PSMB8P28062 276 aa12.76□□□□□ -0.37
NPM1-201ENST00000296930 G6PCP35575 357 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms