RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 TNFRSF19Q9NS68 423 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 DOCK11Q5JSL3 2073 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 RRHO14718 337 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 PCBD1P61457 104 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 FOXI1Q12951 378 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 PDPNQ86YL7 162 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 WFDC3Q8IUB2 231 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 AICDAQ9GZX7 198 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 PRR33A8MZF0 331 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 METRNLQ641Q3 311 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 RCHY1Q96PM5 261 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 DNAJB12Q9NXW2 375 aaKnown RBP9.94□□□□□ -0.82
SNIP1-201ENST00000296215 IGLV3-25P01717 112 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 SPRYD7Q5W111 196 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 TEPPQ6URK8 271 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 MRPL43Q8N983 215 aaKnown RBP9.94□□□□□ -0.82
SNIP1-201ENST00000296215 YPEL4Q96NS1 127 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 FOXQ1Q9C009 403 aa9.94□□□□□ -0.82
SNIP1-201ENST00000296215 K7ERJ3 54 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 HHEXQ03014 270 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF718Q3SXZ3 478 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 TMEM211Q6ICI0 200 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 RPP25LQ8N5L8 163 aaKnown RBP9.93□□□□□ -0.82
SNIP1-201ENST00000296215 VSTM2LQ96N03 204 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 NPCDR1Q9BY65 106 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 LAMB1P07942 1786 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 ECM29Q5VYK3 1845 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 PLGLAQ15195 96 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 FLYWCH2Q96CP2 140 aaKnown RBP9.93□□□□□ -0.82
SNIP1-201ENST00000296215 C18orf12Q96KH6 178 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 A0A1B0GUL6 1792 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 NKX2-2O95096 273 aa9.93□□□□□ -0.82
SNIP1-201ENST00000296215 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNIP1-201ENST00000296215 PRRC2BQ5JSZ5 2229 aaKnown RBP9.93□□□□□ -0.82
SNIP1-201ENST00000296215 C17orf51A8MQB3 221 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 DHRS3O75911 302 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
SNIP1-201ENST00000296215 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
SNIP1-201ENST00000296215 MBNL2Q5VZF2 373 aaKnown RBP9.92□□□□□ -0.82
SNIP1-201ENST00000296215 ASCL5Q7RTU5 278 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 UBALD1Q8TB05 177 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 SSC4DQ8WTU2 575 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 HCFC2Q9Y5Z7 792 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 A0A087WV48 116 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 CST6Q15828 149 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 KLHDC9Q8NEP7 349 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 IGHV4-39P01824 125 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 CD40P25942 277 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 RBPMS2Q6ZRY4 209 aaKnown RBP9.92□□□□□ -0.82
SNIP1-201ENST00000296215 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 OR9G1Q8NH87 305 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 CDK5RAP2Q96SN8 1893 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 CCL5P13501 91 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 CD70P32970 193 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 ASIPP42127 132 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 FOXI2Q6ZQN5 318 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 RNF186Q9NXI6 227 aa9.92□□□□□ -0.82
SNIP1-201ENST00000296215 NAV1Q8NEY1 1877 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 CABIN1Q9Y6J0 2220 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 NPFFO15130 113 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 LINC01590Q5TEZ4 76 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 FOXC2Q99958 501 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 SPATA25Q9BR10 227 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 AMMECR1Q9Y4X0 333 aaPredicted RBP9.91□□□□□ -0.82
SNIP1-201ENST00000296215 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
SNIP1-201ENST00000296215 COL2A1P02458 1487 aaPredicted RBP9.91□□□□□ -0.82
SNIP1-201ENST00000296215 IL11RAQ14626 422 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 STPG1Q5TH74 334 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 NEGR1Q7Z3B1 354 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 TM4SF1P30408 202 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF141Q15928 474 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 LINC01555Q8NAE3 123 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 IFI27L1Q96BM0 104 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 WNT10BO00744 389 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 SP9P0CG40 484 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 VGLL4Q14135 290 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 OR4F17Q8NGA8 305 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 VPREB3Q9UKI3 123 aa9.91□□□□□ -0.82
SNIP1-201ENST00000296215 RP1P56715 2156 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 CELA3BP08861 270 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 ID3Q02535 119 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 DUSP28Q4G0W2 176 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 C17orf99Q6UX52 265 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 ZDHHC23Q8IYP9 409 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 C6orf106Q9H6K1 298 aaPredicted RBP9.9□□□□□ -0.82
SNIP1-201ENST00000296215 NDUFC2O95298 119 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 ZNF542PQ5EBM4 170 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 LHFPL1Q86WI0 220 aa9.9□□□□□ -0.82
SNIP1-201ENST00000296215 BRWD1Q9NSI6 2320 aa9.9□□□□□ -0.83
SNIP1-201ENST00000296215 GLMPQ8WWB7 406 aa9.9□□□□□ -0.83
SNIP1-201ENST00000296215 FAM90A26D6RGX4 464 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms