RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
CCDC140-201ENST00000295226 OR4C13Q8NGP0 309 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 PCNPQ8WW12 178 aaKnown RBP12.1□□□□□ -0.47
CCDC140-201ENST00000295226 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 OR5AC2Q9NZP5 309 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 NSG2Q9Y328 171 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 K7EPK0 472 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 HPRT1P00492 218 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 ZP3P21754 424 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
CCDC140-201ENST00000295226 EBI3Q14213 229 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 THNSL2Q86YJ6 484 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 Q8N6K4 173 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 CD300LFQ8TDQ1 290 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
CCDC140-201ENST00000295226 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 A6NDX4 124 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
CCDC140-201ENST00000295226 RBFOX2O43251 390 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC140-201ENST00000295226 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 FGF2P09038 288 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 ZNF695Q8IW36 515 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 RNF141Q8WVD5 230 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 R3HDM4Q96D70 268 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 CYTL1Q9NRR1 136 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 TPSG1Q9NRR2 321 aa12.09□□□□□ -0.47
CCDC140-201ENST00000295226 SH2D7A6NKC9 451 aaPredicted RBP12.08□□□□□ -0.48
CCDC140-201ENST00000295226 ST8SIA3O43173 380 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 SLC25A17O43808 307 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 CHST1O43916 411 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 JTBO76095 146 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 FAM157CP0CG43 387 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 HKR1P10072 659 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
CCDC140-201ENST00000295226 SRSF2Q01130 221 aaKnown RBP12.08□□□□□ -0.48
CCDC140-201ENST00000295226 MMDQ15546 238 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 DHRS7BQ6IAN0 325 aaPredicted RBP12.08□□□□□ -0.48
CCDC140-201ENST00000295226 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
CCDC140-201ENST00000295226 TCTEX1D1Q8N7M0 179 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 SLC35G3Q8N808 338 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 NF1P21359 2839 aa12.08□□□□□ -0.48
CCDC140-201ENST00000295226 TNCP24821 2201 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 TRAV3A0A0B4J244 114 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 A0A0G2JRQ6 117 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 DNAJC9-AS1A6NH13 148 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 FGF16O43320 207 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
CCDC140-201ENST00000295226 PSG5Q15238 335 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
CCDC140-201ENST00000295226 TAF15Q92804 592 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC140-201ENST00000295226 RHOVQ96L33 236 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 CLCC1Q96S66 551 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 SLC25A33Q9BSK2 321 aa12.07□□□□□ -0.48
CCDC140-201ENST00000295226 MARCH11A6NNE9 402 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 NQO2P16083 231 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 P2RY1P47900 373 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 PJVKQ0ZLH3 352 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 UQCC3Q6UW78 93 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 FAM212BQ9NTI7 297 aaPredicted RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 RAB19A4D1S5 217 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 MSGN1A6NI15 193 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 FCN1O00602 326 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 NBR2O15453 112 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 GPR137BO60478 399 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 HRASP01112 189 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 PVALBP20472 110 aaPredicted RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 M6PRP20645 277 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 VDAC1P21796 283 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 LGALS7P47929 136 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 AKR1C2P52895 323 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 SCGB2A2Q13296 93 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 SAT2Q96F10 170 aaPredicted RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 TSNAXQ99598 290 aaKnown RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 LSM5Q9Y4Y9 91 aaKnown RBP12.06□□□□□ -0.48
CCDC140-201ENST00000295226 POMT1Q9Y6A1 747 aa12.06□□□□□ -0.48
CCDC140-201ENST00000295226 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms