RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HNF4GQ14541 408 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 HAGHQ16775 308 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 SP5Q6BEB4 398 aaPredicted RBP7.44□□□□□ -1.22
PDPN-201ENST00000294489 LCN15Q6UWW0 184 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 ABHD12Q8N2K0 398 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 TIMD4Q96H15 378 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 RCC1LQ96I51 464 aaKnown RBP7.44□□□□□ -1.22
PDPN-201ENST00000294489 NPCDR1Q9BY65 106 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 ZNF257Q9Y2Q1 563 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 H0YJW9 148 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 SOHLH1Q5JUK2 328 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 CFAP161Q6P656 301 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 CLDND2Q8NHS1 167 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 RAB1CQ92928 201 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 ST6GALNAC6Q969X2 333 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 FLYWCH2Q96CP2 140 aaKnown RBP7.44□□□□□ -1.22
PDPN-201ENST00000294489 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 HINT2Q9BX68 163 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 TMEM133Q9H2Q1 129 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 BET1LQ9NYM9 111 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 SMCO3A2RU48 225 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 RRHO14718 337 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 SOX15O60248 233 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 MPDU1O75352 247 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 KBTBD11O94819 623 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 HSPB1P04792 205 aaKnown RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 RNF224P0DH78 156 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR13C7P0DN81 318 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 REG1BP48304 166 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 KHDC3LQ587J8 217 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 ZNF506Q5JVG8 444 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 TMEM88Q6PEY1 159 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PDPNQ86YL7 162 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 TGIF2LXQ8IUE1 241 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR8B3Q8NGG8 313 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR4C13Q8NGP0 309 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 TNFRSF14Q92956 283 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 LHX4Q969G2 390 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 NEIL1Q96FI4 390 aaPredicted RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR8B2Q96RD0 313 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PLEKHA3Q9HB20 300 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 NBASA2RRP1 2371 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 YLPM1P49750 1951 aaKnown RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 MAP1LC3B2A6NCE7 125 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 SRRM4A7MD48 611 aaKnown RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 NPY1RP25929 384 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 RAB13P51153 203 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 DLK1P80370 383 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 FFAR4Q5NUL3 377 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 AVPI1Q5T686 147 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 WDR25Q64LD2 544 aaPredicted RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PCGF1Q9BSM1 259 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 MAP1LC3BQ9GZQ8 125 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 GNG13Q9P2W3 67 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 WDR83OSQ9Y284 106 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 hCG_1809904A0A1W2PP81 198 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 A0A1W2PPE2 198 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 A0A1W2PR64 198 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 A0A1W2PRV1 198 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 IFNA1P01562 189 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PRB1P04280 392 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 SAA1P0DJI8 122 aaPredicted RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 MDKP21741 143 aaPredicted RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 MC5RP33032 325 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 EFNA4P52798 201 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PRRX1P54821 245 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR10G9Q8NGN4 311 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR10G7Q8NGN6 311 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 OR5B3Q8NH48 314 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 RXFP4Q8TDU9 374 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 NABP2Q9BQ15 211 aa7.43□□□□□ -1.22
PDPN-201ENST00000294489 PATZ1Q9HBE1 687 aaKnown RBP7.43□□□□□ -1.22
PDPN-201ENST00000294489 DCHS2Q6V1P9 2916 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 PPIAL4CA0A0B4J2A2 164 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 M0R036 132 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 PPIAL4GP0DN37 164 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 PRCDQ00LT1 54 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 ICAM4Q14773 271 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 AKIRIN2Q53H80 203 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 CBLN2Q8IUK8 224 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 RPP25LQ8N5L8 163 aaKnown RBP7.42□□□□□ -1.22
PDPN-201ENST00000294489 ACTR3CQ9C0K3 210 aaPredicted RBP7.42□□□□□ -1.22
PDPN-201ENST00000294489 UBTD1Q9HAC8 227 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 WASHC3Q9Y3C0 194 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 CTXND1A0A1B0GTU2 59 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 ZFP92A6NM28 416 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 CYB5BO43169 146 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 LY6HO94772 140 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 FGF8P55075 233 aaPredicted RBP7.42□□□□□ -1.22
PDPN-201ENST00000294489 ATP5IP56385 69 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms