RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 KBTBD11-OT1A0A1B0GTJ5 212 aa12.58□□□□□ -0.39
SEC16A-202ENST00000290037 IFITM3Q01628 133 aa12.58□□□□□ -0.39
SEC16A-202ENST00000290037 DEFB124Q8NES8 71 aa12.58□□□□□ -0.39
SEC16A-202ENST00000290037 DOCK7Q96N67 2140 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
SEC16A-202ENST00000290037 NPPCP23582 126 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 OR10S1Q8NGN2 331 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 A0A1W2PR77 199 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 FSCN3Q9NQT6 498 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 UPK2O00526 184 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 ANOS1P23352 680 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 SRSF4Q08170 494 aaKnown RBP12.58□□□□□ -0.4
SEC16A-202ENST00000290037 TBL2Q9Y4P3 447 aaKnown RBP12.58□□□□□ -0.4
SEC16A-202ENST00000290037 A0A1B0GV72 72 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 YAE1D1Q9NRH1 226 aa12.58□□□□□ -0.4
SEC16A-202ENST00000290037 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-202ENST00000290037 CELA2BP08218 269 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-202ENST00000290037 PRNTQ86SH4 94 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 DDB2Q92466 427 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 TGIF2-C20orf24A0A0A6YYL0 155 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 LEMD1Q68G75 181 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
SEC16A-202ENST00000290037 COL4A5P29400 1685 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 C9JCJ5 164 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 ABCA1O95477 2261 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 DTX4Q9Y2E6 619 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 PLXND1Q9Y4D7 1925 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 IGHV3-43A0A0B4J1X8 118 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 RNF222A6NCQ9 220 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 OR11H12B2RN74 326 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 HRKO00198 91 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 IGHV3-43DP0DP04 118 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-202ENST00000290037 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 OR5A1Q8NGJ0 315 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 COL4A1P02462 1669 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 DCAF12L2Q5VW00 463 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 RCC1LQ96I51 464 aaKnown RBP12.57□□□□□ -0.4
SEC16A-202ENST00000290037 AICDAQ9GZX7 198 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 IL36RNQ9UBH0 155 aa12.57□□□□□ -0.4
SEC16A-202ENST00000290037 FAM90A27PA6NNH2 459 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 WDYHV1Q96HA8 205 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 UBTD1Q9HAC8 227 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 SMIM13P0DJ93 91 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 GFRA1P56159 465 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF488Q96MN9 340 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 NABP2Q9BQ15 211 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 LMX1BO60663 402 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 DNAL4O96015 105 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 RCC1P18754 421 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-202ENST00000290037 TBR1Q16650 682 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 ZIC4Q8N9L1 334 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 CCL21O00585 134 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 ORMDL2Q53FV1 153 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 TMEM52Q8NDY8 209 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 CCL20P78556 96 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-202ENST00000290037 PNKDQ8N490 385 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 TICRRQ7Z2Z1 1910 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 LOC105371242A0A075B767 164 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 STPG1Q5TH74 334 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 ORMDL3Q8N138 153 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 DPM3Q9P2X0 92 aa12.56□□□□□ -0.4
SEC16A-202ENST00000290037 NPIPB7O75200 414 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 BATF2Q8N1L9 274 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 ST20Q9HBF5 79 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 HYAL3O43820 417 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-202ENST00000290037 KLRB1Q12918 225 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 NR2C2APQ86WQ0 139 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 C18orf12Q96KH6 178 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 TEX45Q8NA69 505 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 FGF16O43320 207 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 FOXC1Q12948 553 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PIN1P1O15428 100 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 LOXL3P58215 753 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 CSRP2Q16527 193 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 C3AR1Q16581 482 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PPIAL4CA0A0B4J2A2 164 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 GDF9O60383 454 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PPIAL4GP0DN37 164 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 SEC11AP67812 179 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 SLC25A45Q8N413 288 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 IMMP1LQ96LU5 166 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms