RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 A0A1B0GW64 132 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 FAM181BA6NEQ2 426 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 CGB1A6NKQ9 187 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 UBA52P62987 128 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 CX3CL1P78423 397 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 NDPQ00604 133 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 SRSF2Q01130 221 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 AARDQ4LEZ3 155 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 ZNF429Q86V71 674 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 MMD2Q8IY49 270 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 OR4A16Q8NH70 328 aa17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.26■□□□□ 0.35
PDLIM3-203ENST00000284771 TEX50A0A1B0GTY4 177 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 M0QZK8 103 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 ST8SIA3O43173 380 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 SNAPC5O75971 98 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 NXPH3O95157 252 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 RNASE1P07998 156 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 CXorf66Q5JRM2 361 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 GSG1LQ6UXU4 331 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 ZNF562Q6V9R5 426 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 FOXRED2Q8IWF2 684 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 OR4D5Q8NGN0 318 aa17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 FOXA2Q9Y261 457 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 SETD2Q9BYW2 2564 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-203ENST00000284771 RBMXL2O75526 392 aaKnown RBP17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 GNB1P62873 340 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 TNXAQ16473 311 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 ZBTB8BQ8NAP8 495 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 C2orf50Q96LR7 162 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 GSKIPQ9P0R6 139 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 PRNDQ9UKY0 176 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 FBXO7Q9Y3I1 522 aa17.24■□□□□ 0.35
PDLIM3-203ENST00000284771 HMX3A6NHT5 357 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 TCF21O43680 179 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 FGF2P09038 288 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 COMPP49747 757 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 OR51B2Q9Y5P1 312 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 EGR2P11161 476 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 BCAP31P51572 246 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 FXYD3Q14802 87 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 OR1S1Q8NH92 325 aa17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 FAM103A1Q9BTL3 118 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-203ENST00000284771 ID3Q02535 119 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 SRSF4Q08170 494 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 SPINK9Q5DT21 86 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 THOC7Q6I9Y2 204 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 SRSF12Q8WXF0 261 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 JMJD8Q96S16 334 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 SPIN2AQ99865 258 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 SPIN2BQ9BPZ2 258 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 COMMD5Q9GZQ3 224 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 NDUFA4L2Q9NRX3 87 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 C2CD3Q4AC94 2353 aa17.22■□□□□ 0.35
PDLIM3-203ENST00000284771 IGHG2P01859 326 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 MAS1LP35410 378 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 HSPE1P61604 102 aaKnown RBP17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 C9orf152Q5JTZ5 239 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 PDCD10Q9BUL8 212 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 ZNF436Q9C0F3 470 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 HSPB7Q9UBY9 170 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 ZNF257Q9Y2Q1 563 aa17.21■□□□□ 0.35
PDLIM3-203ENST00000284771 TRIM77I1YAP6 450 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 ACTL6BO94805 426 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 CNIH1O95406 144 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 TNFRSF9Q07011 255 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 C11orf87Q6NUJ2 197 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 OR10W1Q8NGF6 305 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 OR5B3Q8NH48 314 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 NMES1Q9C002 83 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 NPFFR1Q9GZQ6 430 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 ZNF702PQ9H963 129 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 FKBP11Q9NYL4 201 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 MSGN1A6NI15 193 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 MBPP02686 304 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 APELAP0DMC3 54 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 PDLIM3Q53GG5 364 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 OR52E5Q8NH55 327 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 MAGT1Q9H0U3 335 aa17.2■□□□□ 0.34
PDLIM3-203ENST00000284771 TEX22C9J3V5 150 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 ATP6V0E1O15342 81 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 IFNA17P01571 189 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 RPL27AP46776 148 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 TMEM95Q3KNT9 176 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 OR1L8Q8NGR8 309 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 GRPEL2Q8TAA5 225 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 ARPC1AQ92747 370 aa17.19■□□□□ 0.34
PDLIM3-203ENST00000284771 NKX2-1P43699 371 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 PRCDQ00LT1 54 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 CD83Q01151 205 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 ASPHD1Q5U4P2 390 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 Q6ZSV7 163 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 Q8N2B8 174 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 FYTTD1Q96QD9 318 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 HINT2Q9BX68 163 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 LINC00527Q9UJ94 153 aa17.18■□□□□ 0.34
PDLIM3-203ENST00000284771 SCGB1D2O95969 90 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 TRAPPC2P0DI81 140 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 TRAPPC2BP0DI82 140 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 SPCS3P61009 180 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms