RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ANKHD1Q8IWZ3 2542 aaKnown RBP7.77□□□□□ -1.16
TRIM55-201ENST00000276573 IGHV2-26A0A0B4J1V2 119 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 NUPL2O15504 423 aaKnown RBP7.77□□□□□ -1.17
TRIM55-201ENST00000276573 CA2P00918 260 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 IGKV1D-33P01593 117 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 IGKV1-33P01594 117 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 MBP02144 154 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 IFNA4P05014 189 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 NPY1RP25929 384 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 DLX1P56177 255 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 PRCDQ00LT1 54 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 ICAM4Q14773 271 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 HAGHQ16775 308 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 ZNF506Q5JVG8 444 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 LCN15Q6UWW0 184 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 SSX7Q7RTT5 188 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 CLRN3Q8NCR9 226 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 CLDND2Q8NHS1 167 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 HINT2Q9BX68 163 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 CLEC7AQ9BXN2 247 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 WASHC3Q9Y3C0 194 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 ITPR1Q14643 2758 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 hCG_1809904A0A1W2PP81 198 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 A0A1W2PPE2 198 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 A0A1W2PR64 198 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 A0A1W2PRV1 198 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 LIPFP07098 398 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 SRP19P09132 144 aaKnown RBP7.77□□□□□ -1.17
TRIM55-201ENST00000276573 OR13C7P0DN81 318 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 Q8N7P7 452 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 BEND2Q8NDZ0 799 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 SLC24A4Q8NFF2 622 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 OR5B3Q8NH48 314 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 TMEM167AQ8TBQ9 72 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 PLEKHA3Q9HB20 300 aa7.77□□□□□ -1.17
TRIM55-201ENST00000276573 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 CACNA1AO00555 2505 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 C22orf46C9J442 243 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 BUB1B-PAK6H3BSN5 160 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 TSPAN4O14817 238 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 MPDU1O75352 247 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OPN1MWP04001 364 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OPN1MW2P0DN77 364 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OPN1MW3P0DN78 364 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 IGFBP2P18065 325 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 USF1P22415 310 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-201ENST00000276573 PLA2G5P39877 138 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 RAB13P51153 203 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 ATP5IP56385 69 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-201ENST00000276573 PMS2P11Q13670 270 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 KHDC3LQ587J8 217 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OR10G4Q8NGN3 311 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OR10G9Q8NGN4 311 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 OR10G7Q8NGN6 311 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 VSTM2AQ8TAG5 236 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 FAM122AQ96E09 287 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 UBTD1Q9HAC8 227 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 NPVFQ9HCQ7 196 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 NDUFA4L2Q9NRX3 87 aa7.76□□□□□ -1.17
TRIM55-201ENST00000276573 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 SMCO3A2RU48 225 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 A6NNC1 897 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 CYB5BO43169 146 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ENSAO43768 121 aaKnown RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 HSPB1P04792 205 aaKnown RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 CDKN1AP38936 164 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 LGALS7P47929 136 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 FGF8P55075 233 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 PRB3Q04118 309 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 OR1L8Q8NGR8 309 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 RITA1Q96K30 269 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ACTR3CQ9C0K3 210 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 COMMD5Q9GZQ3 224 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 MAP1LC3BQ9GZQ8 125 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 GNG13Q9P2W3 67 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ONECUT1Q9UBC0 465 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ABCA4P78363 2273 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 LOC105371242A0A075B767 164 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 CTXND1A0A1B0GTU2 59 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 SOX15O60248 233 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 NDUFS7O75251 213 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 FBP1P09467 338 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ARF6P62330 175 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ACOT6Q3I5F7 207 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 C2orf83Q53S99 150 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-201ENST00000276573 SOHLH1Q5JUK2 328 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 OR10W1Q8NGF6 305 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 C1orf159Q96HA4 380 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 SSBP3Q9BWW4 388 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms