RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PTPRFP10586 1907 aa10.06□□□□□ -0.8
SHPRH-201ENST00000275233 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.82e-7■□□□□ 10.8
SHPRH-201ENST00000275233 ALX4Q9H161 411 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-201ENST00000275233 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 BIVMQ86UB2 503 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 MRAP2Q96G30 205 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 LTBRP36941 435 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 OR13A1Q8NGR1 328 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 SPSB4Q96A44 273 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 C7orf66A4D0T2 115 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 PKIAP61925 76 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 ZNF660Q6AZW8 331 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-201ENST00000275233 COLCA1Q6ZS62 124 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
SHPRH-201ENST00000275233 SEC16AO15027 2179 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 TFF3Q07654 80 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 LINC01587Q99440 93 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 TMEM160Q9NX00 188 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
SHPRH-201ENST00000275233 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 RND3P61587 244 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 WDR82Q6UXN9 313 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 COX6CP09669 75 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 CCL3L1P16619 93 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 IGFBP2P18065 325 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 TNFSF10P50591 281 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 H2BFSP57053 126 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 C17orf98A8MV24 154 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 C12orf77C9JDV5 145 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 IL6RP08887 468 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-201ENST00000275233 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 C10orf128Q5T292 105 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 DPM3Q9P2X0 92 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 A6NJY4 79 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 GCHFRP30047 84 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 RPS20P60866 119 aaKnown RBP10.04□□□□□ -0.8
SHPRH-201ENST00000275233 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 EFEMP2O95967 443 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 AGAP20933 346 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 WDYHV1Q96HA8 205 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 LINC00470Q9BZP3 86 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
SHPRH-201ENST00000275233 UMODP07911 640 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 PSG7Q13046 419 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 CIRBPQ14011 172 aaKnown RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 DICER1Q9UPY3 1922 aaKnown RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 CGAP01215 116 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 SRD5A1P18405 259 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 RPS11P62280 158 aaKnown RBP eCLIP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 IGLV3-21P80748 117 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 Q5BKY6 102 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 C1QTNF12Q5T7M4 302 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 CLDND2Q8NHS1 167 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 FOXD3Q9UJU5 478 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 LDLRAD4O15165 306 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 SMIM8Q96KF7 97 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 NUTF2P61970 127 aaKnown RBP10.03□□□□□ -0.8
SHPRH-201ENST00000275233 TMEM170BQ5T4T1 132 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 OR1P1Q8NH06 330 aa10.03□□□□□ -0.8
SHPRH-201ENST00000275233 LHX2P50458 406 aa10.02□□□□□ -0.8
SHPRH-201ENST00000275233 FOXC2Q99958 501 aa10.02□□□□□ -0.8
SHPRH-201ENST00000275233 GP6Q9HCN6 339 aa10.02□□□□□ -0.8
SHPRH-201ENST00000275233 CFDP00746 253 aaPredicted RBP10.02□□□□□ -0.8
SHPRH-201ENST00000275233 TOMM7Q9P0U1 55 aa10.02□□□□□ -0.8
SHPRH-201ENST00000275233 CHD5Q8TDI0 1954 aa10.02□□□□□ -0.8
SHPRH-201ENST00000275233 PATJQ8NI35 1801 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 TMEM14DPA8MWL7 114 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 ZNF708P17019 499 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 VDAC2P45880 294 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-201ENST00000275233 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-201ENST00000275233 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 SOD3P08294 240 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 VWCEQ96DN2 955 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 MSGN1A6NI15 193 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 CACNG7P62955 275 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 M0QZK8 103 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.81
SHPRH-201ENST00000275233 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
SHPRH-201ENST00000275233 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.81
SHPRH-201ENST00000275233 ABCA7Q8IZY2 2146 aa10.01□□□□□ -0.81
SHPRH-201ENST00000275233 TCF24Q7RTU0 167 aa10.01□□□□□ -0.81
SHPRH-201ENST00000275233 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
SHPRH-201ENST00000275233 PSME4Q14997 1843 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms