RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 DEFB127Q9H1M4 99 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 BOKQ9UMX3 212 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 RAB29O14966 203 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 SS18L1O75177 396 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-202ENST00000273342 LYZL6O75951 148 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 GNG10P50151 68 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 GNG12Q9UBI6 72 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 SMG1Q96Q15 3661 aaKnown RBP10.72□□□□□ -0.69
COL8A1-202ENST00000273342 HCFC1P51610 2035 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 GCHFRP30047 84 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 RPEL1Q2QD12 228 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 COL5A1-AS1Q5SY13 56 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 TIPARPQ7Z3E1 657 aaKnown RBP10.72□□□□□ -0.69
COL8A1-202ENST00000273342 MOB3BQ86TA1 216 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
COL8A1-202ENST00000273342 M0R1X1 148 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 CXorf1O96002 111 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 GPX1P07203 203 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 STAG3L2P0CL84 134 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 STAG3L3P0CL85 134 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 SRIP30626 198 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 MPV17P39210 176 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 UTF1Q5T230 341 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 SSBP3Q9BWW4 388 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-202ENST00000273342 MGAQ8IWI9 3026 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 A8MXE2 369 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 ERVK11-1P61568 191 aa10.71□□□□□ -0.69
COL8A1-202ENST00000273342 IGKV3D-15A0A087WSY6 115 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 PROP1O75360 226 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 AGFG2O95081 481 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 OR5G3P0C626 314 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 GPR12P47775 334 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 FABP6P51161 128 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 LGALS4P56470 323 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 SELENOTP62341 195 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 PSG5Q15238 335 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 OR1C1Q15619 314 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 EFNB3Q15768 340 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 VWC2Q2TAL6 325 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 CENPWQ5EE01 88 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 UNQ5815/PRO19632Q6UWF5 114 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 MIR17HGQ75NE6 70 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 EAF1Q96JC9 268 aaPredicted RBP10.71□□□□□ -0.7
COL8A1-202ENST00000273342 SLC35E1Q96K37 410 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 LINC00470Q9BZP3 86 aa10.71□□□□□ -0.7
COL8A1-202ENST00000273342 TNRC6AQ8NDV7 1962 aaKnown RBP10.7□□□□□ -0.7
COL8A1-202ENST00000273342 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
COL8A1-202ENST00000273342 ZNF146Q15072 292 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 STPG3Q8N7X2 389 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 Q8TCH9 128 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 CT55Q8WUE5 264 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 HSD17B10Q99714 261 aaKnown RBP10.7□□□□□ -0.7
COL8A1-202ENST00000273342 TTTY12Q9BZ98 90 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 OOEPA6NGQ2 149 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 GNG4P50150 75 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 ZNF83P51522 516 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 PTTG1IPP53801 180 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 TBC1D28Q2M2D7 210 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 NRN1LQ496H8 165 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 TMEM251Q8N6I4 163 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 ABCA1O95477 2261 aa10.7□□□□□ -0.7
COL8A1-202ENST00000273342 IGFBP2P18065 325 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 ARG2P78540 354 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 ABHD17BQ5VST6 288 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
COL8A1-202ENST00000273342 TAAR6Q96RI8 345 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 ATMQ13315 3056 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 A0A1W2PS18 150 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 OR7C2O60412 319 aa10.69□□□□□ -0.7
COL8A1-202ENST00000273342 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
COL8A1-202ENST00000273342 HELTA6NFD8 242 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 SMPD2O60906 423 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 HYPMO75409 117 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 NDUFB8O95169 186 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 OPRK1P41145 380 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 GAGE1Q13065 139 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 ZNF718Q3SXZ3 478 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 Q8N976 141 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 ZFP30Q9Y2G7 519 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 V9GYV3 84 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 C20orf202A1L168 122 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 CCL25O15444 150 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 GFRA3O60609 400 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 EIF4EBP1Q13541 118 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-202ENST00000273342 MLANAQ16655 118 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 Q8IYB0 196 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 C1orf174Q8IYL3 243 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 C1orf159Q96HA4 380 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 FAM173AQ9BQD7 235 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 B4GALT7Q9UBV7 327 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 KMT2EQ8IZD2 1858 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 DMXL2Q8TDJ6 3036 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms