RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TMEM101Q96IK0 257 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 SIRT4Q9Y6E7 314 aaPredicted RBP6.84□□□□□ -1.31
LIMD1-201ENST00000273317 NPFFO15130 113 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 NPIPB7O75200 414 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 GHRHP01286 108 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 UNQ9370/PRO34162Q6UXP9 181 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 CCL13Q99616 98 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 H0YL77 283 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 RFLNBQ8N5W9 214 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 LOXL4Q96JB6 756 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 NPCDR1Q9BY65 106 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 SPINT1O43278 529 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 FOXS1O43638 330 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 ASCL4Q6XD76 172 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 SELENOKQ9Y6D0 94 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 C1QTNF9BB2RNN3 333 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 PAX1P15863 534 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.84□□□□□ -1.31
LIMD1-201ENST00000273317 APCDD1LQ8NCL9 501 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 SH3BGRL3Q9H299 93 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 IGHV3-21A0A0B4J1V1 117 aa6.84□□□□□ -1.32
LIMD1-201ENST00000273317 SCTP09683 121 aa6.84□□□□□ -1.32
LIMD1-201ENST00000273317 TCF19Q9Y242 345 aa6.84□□□□□ -1.32
LIMD1-201ENST00000273317 C19orf67A6NJJ6 358 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 CCL21O00585 134 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 FGFRL1Q8N441 504 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 LRTM2Q8N967 370 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 C7orf71A4D174 169 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 C9orf172C9J069 976 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 GPR146Q96CH1 333 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 CHODLQ9H9P2 273 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 DTX4Q9Y2E6 619 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF56Q15929 161 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 UNQ5815/PRO19632Q6UWF5 114 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 CIARTQ8N365 385 aaPredicted RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 A0A1W2PPE3 182 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF205O95201 554 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 GATAD1Q8WUU5 269 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 NEU1Q99519 415 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 EFNB1P98172 346 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF385AQ96PM9 386 aaKnown RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 SMOC1Q9H4F8 434 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 EML5Q05BV3 1969 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 SPG11Q96JI7 2443 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 C3AR1Q16581 482 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 MEIG1Q5JSS6 88 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 G6PC2Q9NQR9 355 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 CBLN4Q9NTU7 201 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 R4GN57 208 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM131Q92545 1883 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 DPRXA6NFQ7 191 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 CLDND2Q8NHS1 167 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 PILRAQ9UKJ1 303 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 HELZP42694 1942 aaKnown RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 TM4SF5O14894 197 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 H2BFSP57053 126 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 SRSF12Q8WXF0 261 aaKnown RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 RCC1LQ96I51 464 aaKnown RBP6.83□□□□□ -1.32
LIMD1-201ENST00000273317 AICDAQ9GZX7 198 aa6.83□□□□□ -1.32
LIMD1-201ENST00000273317 FAM169BQ8N8A8 192 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 TLNRD1Q9H1K6 362 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 CD160O95971 181 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 PRSS2P07478 247 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 PRSS12P56730 875 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 CXorf66Q5JRM2 361 aaPredicted RBP6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF71Q9NQZ8 489 aaPredicted RBP6.82□□□□□ -1.32
LIMD1-201ENST00000273317 PGPA6NDG6 321 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ELOVL5Q9NYP7 299 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 RNF115Q9Y4L5 304 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 CLDN16Q9Y5I7 305 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 TYMSP04818 313 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 FCGR2BP31994 310 aaPredicted RBP6.82□□□□□ -1.32
LIMD1-201ENST00000273317 NRN1LQ496H8 165 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 MBNL2Q5VZF2 373 aaKnown RBP6.82□□□□□ -1.32
LIMD1-201ENST00000273317 OR5P3Q8WZ94 311 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 RECKO95980 971 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 IFITM3Q01628 133 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ITLN1Q8WWA0 313 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 DLL3Q9NYJ7 618 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 C1QL1O75973 258 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 GFRA1P56159 465 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 SDF2L1Q9HCN8 221 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 IGKV1-8A0A0C4DH67 115 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 DUX5Q96PT3 197 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 IMMP2LQ96T52 175 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF708P17019 499 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF818PQ6ZRF7 136 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF488Q96MN9 340 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 FTH1P19P0C7X4 201 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ASIPP42127 132 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 DNM1P46Q6ZS02 220 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF501Q96CX3 271 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms