RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 LOC107984156A0A0G2JMH3 177 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 RRHO14718 337 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 YBX1P67809 324 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC38A11Q08AI6 406 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 VMA21Q3ZAQ7 101 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 ARL17AQ8IVW1 177 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 SPEGQ15772 3267 aa7.51□□□□□ -1.21
CTDSPL-201ENST00000273179 TMSB15BA0A087X1C1 80 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 H0Y8X5 98 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 BTCP35070 178 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 XGP55808 180 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 GNB2P62879 340 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 WFDC2Q14508 124 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC39A9Q9NUM3 307 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 PRRC2BQ5JSZ5 2229 aaKnown RBP7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A1B0GX51 115 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 RNF222A6NCQ9 220 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 CD300LBA8K4G0 201 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 OR4C16Q8NGL9 310 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 UPK1AO00322 258 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 BLVRBP30043 206 aaPredicted RBP7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 EFNB2P52799 333 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF146Q15072 292 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 FAM27D1Q5T7N8 215 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 PAQR6Q6TCH4 344 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 CBLL1Q75N03 491 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 CKLFQ9UBR5 152 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 Q6AWC8 147 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 SDF2Q99470 211 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 SLAMF8Q9P0V8 285 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 CACNG5Q9UF02 275 aa7.5□□□□□ -1.21
CTDSPL-201ENST00000273179 UNC119Q13432 240 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 LCN12Q6JVE5 192 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 NOXRED1Q6NXP6 359 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM54Q969K7 222 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 DDIT4LQ96D03 193 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 SNRNP40Q96DI7 357 aaKnown RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 C1QTNF5Q9BXJ0 243 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 SHROOM3Q8TF72 1996 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A087WUU8 490 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 F6UB75 175 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 CD164Q04900 197 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 PIANPQ8IYJ0 282 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 PGBD5Q8N414 524 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 GEMIN6Q8WXD5 167 aaKnown RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 GABARAPL1Q9H0R8 117 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM242Q9NWH2 141 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 METRNQ9UJH8 293 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 MCTS1Q9ULC4 181 aaKnown RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 MGST3O14880 152 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 SOCS1O15524 211 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 IGLV3-27P01718 113 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 PFN1P07737 140 aaKnown RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 FGF6P10767 208 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 UBE2L3P68036 154 aaKnown RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 RTBDNQ9BSG5 229 aaPredicted RBP7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 RARRES3Q9UL19 164 aa7.49□□□□□ -1.21
CTDSPL-201ENST00000273179 TRAV14DV4A0A0A6YYC5 116 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 C1QL1O75973 258 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TIMP1P01033 207 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 RND3P61587 244 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNRF2Q8NHG8 242 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 MRPL24Q96A35 216 aaKnown RBP7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 NABP1Q96AH0 204 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 WDYHV1Q96HA8 205 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 RPP25Q9BUL9 199 aaKnown RBP7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 J3QLW9 94 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC17A2O00624 439 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SPINT3P49223 89 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 S100A7L2Q5SY68 101 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 COMMD6Q7Z4G1 85 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM150AQ86TG1 271 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 KXD1Q9BQD3 176 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 MLST8Q9BVC4 326 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SCN8AQ9UQD0 1980 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 A0A087WV48 116 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 CT62P0C5K7 136 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 LINC00869P0C866 280 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 DLX1P56177 255 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 DCAF12Q5T6F0 453 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 OR4C11Q6IEV9 310 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 PPP1R32Q7Z5V6 425 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TDHQ8IZJ6 230 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 RNF128Q8TEB7 428 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TMEM59Q9BXS4 323 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 MYO7AQ13402 2215 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 CDX4O14627 284 aaPredicted RBP7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SPRY2O43597 315 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 ZNF688P0C7X2 276 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 CCL5P13501 91 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 ADORA2A-AS1P86434 159 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC25A44Q96H78 314 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms