RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TM4SF20Q53R12 229 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 HACD4Q5VWC8 232 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 C22orf42Q6IC83 251 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 BTNL8Q6UX41 500 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 ZNF367Q7RTV3 350 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 FYTTD1Q96QD9 318 aaKnown RBP6.66□□□□□ -1.34
TPM3-201ENST00000271850 OR2A7Q96R45 310 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 ST6GALNAC5Q9BVH7 336 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 ATG5Q9H1Y0 275 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 SLC2A9Q9NRM0 540 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 SLC2A8Q9NY64 477 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 TECRQ9NZ01 308 aaKnown RBP6.66□□□□□ -1.34
TPM3-201ENST00000271850 SPATA2Q9UM82 520 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 DNAH2Q9P225 4427 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 IGLC7A0M8Q6 106 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 PDCD5O14737 125 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 SCAF4O95104 1147 aaKnown RBP6.65□□□□□ -1.34
TPM3-201ENST00000271850 GADD45AP24522 165 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 ARL3P36405 182 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 PSMD7P51665 324 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 MRPS15P82914 257 aaKnown RBP6.65□□□□□ -1.34
TPM3-201ENST00000271850 TIMM50Q3ZCQ8 353 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 ZNF57Q68EA5 555 aaPredicted RBP6.65□□□□□ -1.34
TPM3-201ENST00000271850 SSX9Q7RTT3 188 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 GVQW1Q8N7I0 195 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 UXS1Q8NBZ7 420 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 IL17DQ8TAD2 202 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 ZNF502Q8TBZ5 544 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 TCTEX1D2Q8WW35 142 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 SLC25A38Q96DW6 304 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 DCUN1D5Q9BTE7 237 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 RNF167Q9H6Y7 350 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 CCL28Q9NRJ3 127 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 TAS2R8Q9NYW2 309 aa6.65□□□□□ -1.34
TPM3-201ENST00000271850 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 IGHV3-35A0A0C4DH35 117 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 A0A0J9YWU9 116 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 TNFSF12O43508 249 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 CLEC2LP0C7M8 214 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 TALDO1P37837 337 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 MFAP2P55001 183 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 OR2B8PP59922 312 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 FAM209BQ5JX69 171 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 OR4A47Q6IF82 309 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 CNIH2Q6PI25 160 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 OR5H6Q8NGV6 325 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 LGALS14Q8TCE9 139 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 GGTLC1Q9BX51 225 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 ZNF436Q9C0F3 470 aaPredicted RBP6.64□□□□□ -1.35
TPM3-201ENST00000271850 DCSTAMPQ9H295 470 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 VCXQ9H320 206 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 TXNL4BQ9NX01 149 aaKnown RBP6.64□□□□□ -1.35
TPM3-201ENST00000271850 ANXA10Q9UJ72 324 aa6.64□□□□□ -1.35
TPM3-201ENST00000271850 KIAA1109Q2LD37 5005 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 METTL21EPA6NDL7 271 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 NOTOA8MTQ0 251 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 CREBL2O60519 120 aaPredicted RBP6.63□□□□□ -1.35
TPM3-201ENST00000271850 ACTL6BO94805 426 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 CLEC3BP05452 202 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 CD36P16671 472 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 HLA-GP17693 338 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 MYL9P24844 172 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 GPR183P32249 361 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 MAS1LP35410 378 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 RPL8P62917 257 aaKnown RBP6.63□□□□□ -1.35
TPM3-201ENST00000271850 PMS2P11Q13670 270 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 ODF3L2Q3SX64 289 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 SLC25A42Q86VD7 318 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 WFDC3Q8IUB2 231 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 OR10W1Q8NGF6 305 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 EEF1AKMT3Q96AZ1 226 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 CNBD2Q96M20 576 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 HSD17B10Q99714 261 aaKnown RBP6.63□□□□□ -1.35
TPM3-201ENST00000271850 BET1LQ9NYM9 111 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 UBQLN2Q9UHD9 624 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 MRPS7Q9Y2R9 242 aaKnown RBP6.63□□□□□ -1.35
TPM3-201ENST00000271850 PRELID3BQ9Y3B1 194 aa6.63□□□□□ -1.35
TPM3-201ENST00000271850 LOC102724200A0A096LPH7 203 aaPredicted RBP6.62□□□□□ -1.35
TPM3-201ENST00000271850 ZNF320A2RRD8 509 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 UPK2O00526 184 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 FCER2P06734 321 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 CTXN2P0C2S0 81 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 GALP22466 123 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 FGF9P31371 208 aaPredicted RBP6.62□□□□□ -1.35
TPM3-201ENST00000271850 WT1-ASQ06250 92 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 POU2AF1Q16633 256 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 ZNF585BQ52M93 769 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 UBE2UQ5VVX9 321 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 SFXN4Q6P4A7 337 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 IZUMO2Q6UXV1 221 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 ZNF66Q6ZN08 573 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 ZNF818PQ6ZRF7 136 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 RPP25LQ8N5L8 163 aaKnown RBP6.62□□□□□ -1.35
TPM3-201ENST00000271850 OR52B4Q8NGK2 314 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 OR13F1Q8NGS4 319 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 TMEM190Q8WZ59 177 aa6.62□□□□□ -1.35
TPM3-201ENST00000271850 DAPK2Q9UIK4 370 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms