RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
PRDM16-201ENST00000270722 ODAMA1E959 279 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF56Q15929 161 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 RBM38Q9H0Z9 239 aaKnown RBP11.44□□□□□ -0.58
PRDM16-201ENST00000270722 BCORQ6W2J9 1755 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 NPIPB11E5RHQ5 1161 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF688P0C7X2 276 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 MESTQ5EB52 335 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 MAVSQ7Z434 540 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 HAPLN4Q86UW8 402 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
PRDM16-201ENST00000270722 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 NTN1O95631 604 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 CCL2P13500 99 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 MRGPRFQ96AM1 343 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 HDHD3Q9BSH5 251 aaPredicted RBP11.43□□□□□ -0.58
PRDM16-201ENST00000270722 IL9P15248 144 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 NHLRC3Q5JS37 347 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 UMODP07911 640 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 ANOS1P23352 680 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 DSPPQ9NZW4 1301 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 PAX1P15863 534 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 DUTP33316 252 aaKnown RBP11.43□□□□□ -0.58
PRDM16-201ENST00000270722 GLRX5Q86SX6 157 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 TMEM30AQ9NV96 361 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 RAMP3O60896 148 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 WNT1P04628 370 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 ATG4DQ86TL0 474 aaPredicted RBP11.43□□□□□ -0.58
PRDM16-201ENST00000270722 C1QL4Q86Z23 238 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 ATAD5Q96QE3 1844 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 RREB1Q92766 1687 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 C1QTNF9P0C862 333 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 SELENOPP49908 381 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 FOXL2P58012 376 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 ERVK11-1P61568 191 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 CX3CL1P78423 397 aa11.43□□□□□ -0.58
PRDM16-201ENST00000270722 PGPA6NDG6 321 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 CD5P06127 495 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 SMOC1Q9H4F8 434 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
PRDM16-201ENST00000270722 OTX1P32242 354 aaPredicted RBP11.42□□□□□ -0.58
PRDM16-201ENST00000270722 RIMKLAQ8IXN7 391 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 OR4D5Q8NGN0 318 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
PRDM16-201ENST00000270722 EPDR1Q9UM22 224 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 GGTLC3B5MD39 225 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 SPRED2Q7Z698 418 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 LINC00470Q9BZP3 86 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
PRDM16-201ENST00000270722 SHISA8B8ZZ34 492 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 SRIP30626 198 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
PRDM16-201ENST00000270722 F8W1H4 67 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 PEX11BO96011 259 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 IFI6P09912 130 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 FAM168AQ92567 244 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 FREM1Q5H8C1 2179 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 IGF2P01344 180 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 TFPI2P48307 235 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 OR11H7Q8NGC8 314 aa11.42□□□□□ -0.58
PRDM16-201ENST00000270722 LINC01549A6NIU2 74 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF137PP52743 207 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 TNFSF13O75888 250 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 PRR19A6NJB7 356 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
PRDM16-201ENST00000270722 COL10A1Q03692 680 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 IMMP2LQ96T52 175 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 LILRA1O75019 489 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 CD300CQ08708 224 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF146Q15072 292 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 NPC2P61916 151 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF479Q96JC4 524 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 CCL4P13236 92 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 MALP21145 153 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 APOBEC3AP31941 199 aaPredicted RBP11.41□□□□□ -0.58
PRDM16-201ENST00000270722 FGF12P61328 243 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.41□□□□□ -0.58
PRDM16-201ENST00000270722 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 CNTFRP26992 372 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 DSCR9P59020 149 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 SHISA4Q96DD7 197 aa11.41□□□□□ -0.58
PRDM16-201ENST00000270722 ZNF883P0CG24 379 aa11.4□□□□□ -0.58
PRDM16-201ENST00000270722 MYF5P13349 255 aa11.4□□□□□ -0.58
PRDM16-201ENST00000270722 EGR1P18146 543 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms