RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 DEFB112Q30KQ8 113 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 RPL7L1Q6DKI1 246 aaKnown RBP19.79■□□□□ 0.76
SSBP4-201ENST00000270061 C12orf54Q6X4T0 127 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 C1orf122Q6ZSJ8 110 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 Q8N7P7 452 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 UBAC2Q8NBM4 344 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 BSCL2Q96G97 398 aaPredicted RBP19.79■□□□□ 0.76
SSBP4-201ENST00000270061 AIFM2Q9BRQ8 373 aa19.79■□□□□ 0.76
SSBP4-201ENST00000270061 MRPL20Q9BYC9 149 aaKnown RBP19.79■□□□□ 0.76
SSBP4-201ENST00000270061 IGHV1-69DA0A0B4J2H0 117 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 TXNL1O43396 289 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 IGHV1-69P01742 117 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 HLA-DRB5Q30154 266 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 ZDHHC16Q969W1 377 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 NABP2Q9BQ15 211 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 SLC25A32Q9H2D1 315 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 RBKSQ9H477 322 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 TMEM89A2RUT3 159 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 LINC00862A6NCI5 91 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 H0YJW9 148 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 CLDN34H7C241 214 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 APOA2P02652 100 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 PDZD9Q8IXQ8 264 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 OR52E5Q8NH55 327 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 RHOVQ96L33 236 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 SIRT7Q9NRC8 400 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 TMEM140Q9NV12 185 aa19.78■□□□□ 0.76
SSBP4-201ENST00000270061 PDLIM3Q53GG5 364 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-201ENST00000270061 ARV1Q9H2C2 271 aa19.77■□□□□ 0.76
SSBP4-201ENST00000270061 PRDM13Q9H4Q3 707 aa19.77■□□□□ 0.76
SSBP4-201ENST00000270061 PSENENQ9NZ42 101 aa19.77■□□□□ 0.76
SSBP4-201ENST00000270061 IL6RP08887 468 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-201ENST00000270061 RELBQ01201 579 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 SSX9Q7RTT3 188 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 OR13D1Q8NGV5 346 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 OR4A16Q8NH70 328 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 OSR1Q8TAX0 266 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-201ENST00000270061 SMIM3Q9BZL3 60 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 WFDC1Q9HC57 220 aa19.76■□□□□ 0.75
SSBP4-201ENST00000270061 BORCS7-ASMTA0A0B4J1R7 106 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 LY86O95711 162 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 RNASE1P07998 156 aaKnown RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 NMBP08949 121 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 COMPP49747 757 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 TMEM177Q53S58 311 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 ZNF429Q86V71 674 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 PDPNQ86YL7 162 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 TGIF2LXQ8IUE1 241 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 VKORC1L1Q8N0U8 176 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 CIB3Q96Q77 187 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 FBN3Q75N90 2809 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 HOXA3O43365 443 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 RBMXL2O75526 392 aaKnown RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 IGKV1-16P04430 117 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 IAPPP10997 89 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 SULT1A1P50225 295 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 OR4A47Q6IF82 309 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 EIF5AL1Q6IS14 154 aaKnown RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 STX12Q86Y82 276 aa19.75■□□□□ 0.75
SSBP4-201ENST00000270061 QTRT1Q9BXR0 403 aaKnown RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 AMMECR1Q9Y4X0 333 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-201ENST00000270061 BUB1B-PAK6H3BSN5 160 aa19.74■□□□□ 0.75
SSBP4-201ENST00000270061 HAX1O00165 279 aa19.74■□□□□ 0.75
SSBP4-201ENST00000270061 MC5RP33032 325 aa19.74■□□□□ 0.75
SSBP4-201ENST00000270061 DIAPH2-AS1Q14236 149 aa19.74■□□□□ 0.75
SSBP4-201ENST00000270061 OR11H6Q8NGC7 330 aa19.74■□□□□ 0.75
SSBP4-201ENST00000270061 UNKLQ9H9P5 680 aaKnown RBP19.74■□□□□ 0.75
SSBP4-201ENST00000270061 SPCS3P61009 180 aa19.73■□□□□ 0.75
SSBP4-201ENST00000270061 Q6YL49 198 aa19.73■□□□□ 0.75
SSBP4-201ENST00000270061 STPG2Q8N412 459 aa19.73■□□□□ 0.75
SSBP4-201ENST00000270061 REG1BP48304 166 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 RAB13P51153 203 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 OR4P4Q8NGL7 312 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 LRRC20Q8TCA0 184 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 DTD1Q8TEA8 209 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 C15orf61A6NNL5 157 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 RNASEK-C17orf49H0YIS7 233 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 CST7O76096 145 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 DYNLT3P51808 116 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 DLX1P56177 255 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 PRB3Q04118 309 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-201ENST00000270061 ZNF266Q14584 549 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 PNKDQ8N490 385 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 PIP4P2Q8N4L2 257 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 OR4C13Q8NGP0 309 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 OR5C1Q8NGR4 320 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 FLYWCH2Q96CP2 140 aaKnown RBP19.72■□□□□ 0.75
SSBP4-201ENST00000270061 GINS3Q9BRX5 216 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 TMEM14BQ9NUH8 114 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 BET1LQ9NYM9 111 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 FOXA2Q9Y261 457 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-201ENST00000270061 WASHC3Q9Y3C0 194 aa19.72■□□□□ 0.75
SSBP4-201ENST00000270061 TRAV3A0A0B4J244 114 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 SRRM4A7MD48 611 aaKnown RBP19.71■□□□□ 0.75
SSBP4-201ENST00000270061 H3BP45 60 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 LY6LH3BQJ8 138 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 COX7A1P24310 79 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 OR2B8PP59922 312 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 TMEM14EPQ6UXP3 125 aa19.71■□□□□ 0.75
SSBP4-201ENST00000270061 PCNPQ8WW12 178 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms