RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TMEM56-RWDD3S4R434 201 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 PLXNB3Q9ULL4 1909 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM265A0A087WTH1 108 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 COX7A1P24310 79 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 ADMP35318 185 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 MYO7BQ6PIF6 2116 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 SPAARA0A1B0GVQ0 90 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 IGHV2-70P01814 119 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 SRSF4Q08170 494 aaKnown RBP9.78□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM97Q5BJF2 176 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 ATP1A1-AS1Q5TC04 95 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM256Q8N2U0 113 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 LAMTOR2Q9Y2Q5 125 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 EREGO14944 169 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 CIDEAO60543 219 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 NUDT3O95989 172 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 CGAP01215 116 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 AMY1AP04745 511 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 MMDQ15546 238 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 Q1RN00 199 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 GFRALQ6UXV0 394 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 NEU1Q99519 415 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.84
VPS33A-201ENST00000267199 TCF19Q9Y242 345 aa9.77□□□□□ -0.84
VPS33A-201ENST00000267199 TRGV8A0A0C4DH27 118 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 A8MWL6 223 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 GCSAMLQ5JQS6 135 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 SLC35E4Q6ICL7 350 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM108Q6UXF1 575 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 FAM222BQ8WU58 562 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM45BQ96B21 275 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 PGPA6NDG6 321 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 ZNF785A8K8V0 405 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 C17orf98A8MV24 154 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 M0R296 226 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 S100A4P26447 101 aaKnown RBP9.77□□□□□ -0.85
VPS33A-201ENST00000267199 PLP1P60201 277 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 RIGQ13278 110 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 OR5P3Q8WZ94 311 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 IGKV1-12A0A0C4DH73 117 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 IGKV1D-12P01611 117 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 NRN1Q9NPD7 142 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
VPS33A-201ENST00000267199 SELENOKQ9Y6D0 94 aa9.77□□□□□ -0.85
VPS33A-201ENST00000267199 LOC102723996A0A087X1L8 192 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 OR4C46A6NHA9 309 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 WNT9BO14905 357 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 NKX2-8O15522 239 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 KLF14Q8TD94 323 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-201ENST00000267199 NABP2Q9BQ15 211 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 C1QTNF5Q9BXJ0 243 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 AMMECR1Q9Y4X0 333 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-201ENST00000267199 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.76□□□□□ -0.85
VPS33A-201ENST00000267199 ZIC4Q8N9L1 334 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 ZNF703Q9H7S9 590 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-201ENST00000267199 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 MGST3O14880 152 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 OR1L8Q8NGR8 309 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 KCNS1Q96KK3 526 aa9.76□□□□□ -0.85
VPS33A-201ENST00000267199 SEBOXQ9HB31 216 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-201ENST00000267199 GZMBP10144 247 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 GPR6P46095 362 aaPredicted RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 TIMD4Q96H15 378 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 CEACAM18A8MTB9 384 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 K7ESF4 209 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 MPV17P39210 176 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM177Q53S58 311 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 HCP5Q6MZN7 132 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 PERPQ96FX8 193 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 CLEC5AQ9NY25 188 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 QRFPP83859 136 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 RPEQ96AT9 228 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
VPS33A-201ENST00000267199 ASCL3Q9NQ33 180 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 MED13LQ71F56 2210 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 DLEU1O43261 78 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 ORM1P02763 201 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 GCSHP23434 173 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 CDPF1Q6NVV7 123 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 BMPERQ8N8U9 685 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 VSTM2AQ8TAG5 236 aa9.75□□□□□ -0.85
VPS33A-201ENST00000267199 MRPL37Q9BZE1 423 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 401.7 ms