RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SERPINE2P07093 398 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 CCNOP22674 350 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 CTSSP25774 331 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 GPR6P46095 362 aaPredicted RBP7.34□□□□□ -1.24
VAPB-201ENST00000265619 Q8N7P7 452 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 ZNF439Q8NDP4 499 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.24
VAPB-201ENST00000265619 V9GYV3 84 aa7.34□□□□□ -1.24
VAPB-201ENST00000265619 HEATR1Q9H583 2144 aaKnown RBP7.34□□□□□ -1.24
VAPB-201ENST00000265619 A0A1W2PNR3 127 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 CA1P00915 261 aaPredicted RBP7.33□□□□□ -1.24
VAPB-201ENST00000265619 F2RP25116 425 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 ARL3P36405 182 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 UQCRFS1P47985 274 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 DCAF12Q5T6F0 453 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 TRAT1Q6PIZ9 186 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 OR1F12Q8NHA8 337 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 BORCS7Q96B45 105 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 YTHDF2Q9Y5A9 579 aaKnown RBP7.33□□□□□ -1.24
VAPB-201ENST00000265619 EML6Q6ZMW3 1958 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 C9orf172C9J069 976 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 C17orf112F2Z3M2 114 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 RBMXL2O75526 392 aaKnown RBP7.33□□□□□ -1.24
VAPB-201ENST00000265619 TOX4O94842 621 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 OSR2Q8N2R0 312 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 OR10P1Q8NGE3 313 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 USF3Q68DE3 2245 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 H0Y980 276 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 CD24P25063 80 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 MEF2CQ06413 473 aaPredicted RBP7.33□□□□□ -1.24
VAPB-201ENST00000265619 GABRA6Q16445 453 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 RHBDD2Q6NTF9 364 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 SMPXQ9UHP9 88 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 ZNF835Q9Y2P0 537 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 LOXL2Q9Y4K0 774 aa7.33□□□□□ -1.24
VAPB-201ENST00000265619 RAMP3O60896 148 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 CLDN1O95832 211 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 IGLV2-14P01704 120 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 CRYBA4P53673 196 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 HBG1P69891 147 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 HBG2P69892 147 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 TBR1Q16650 682 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 ZDHHC16Q969W1 377 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 PMCHL2Q9BQD1 86 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 PIMREGQ9BSJ6 248 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 WDR54Q9H977 334 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 KMT2EQ8IZD2 1858 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 PCNX1Q96RV3 2341 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 GAGE10A6NGK3 116 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 M0R1X1 148 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 RAB9AP51151 201 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 HIST3H3Q16695 136 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 SLC25A47Q6Q0C1 308 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 ANKRD37Q7Z713 158 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 DOLPP1Q86YN1 238 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 OR10G3Q8NGC4 313 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 OR8B3Q8NGG8 313 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
VAPB-201ENST00000265619 OR8B2Q96RD0 313 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 ARL2-SNX15V9GYD0 113 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 EXPH5Q8NEV8 1989 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 IGF2RP11717 2491 aa7.32□□□□□ -1.24
VAPB-201ENST00000265619 C7orf71A4D174 169 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 CD300LBA8K4G0 201 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 PMS2P5A8MQ11 134 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 GDF1P27539 372 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 EDDM3BP56851 147 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 ZNF585BQ52M93 769 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 OR10J3Q5JRS4 329 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 GDF5OSQ5U4N7 250 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 GNB1LQ9BYB4 327 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 LIPT2A6NK58 231 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 C10orf142B7Z368 130 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 TUSC2O75896 110 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 HAND1O96004 215 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 RHOBP62745 196 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 MALLQ13021 153 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 SRSF7Q16629 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
VAPB-201ENST00000265619 RPEL1Q2QD12 228 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 PCSK4Q6UW60 755 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 TMEM14EPQ6UXP3 125 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 NEGR1Q7Z3B1 354 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 DEFB124Q8NES8 71 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 PP6455Q8WZ26 134 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 HIF1ANQ9NWT6 349 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 A0A1B0GW15 77 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 FRG2CA6NGY1 282 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 DEGS1O15121 323 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 PTGDSP41222 190 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 ARF6P62330 175 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 TMEM38BQ9NVV0 291 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms