RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PUS1Q9Y606 427 aaKnown RBP eCLIP7.62□□□□□ -1.19
SSR3-201ENST00000265044 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 USP24Q9UPU5 2620 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 IGHV2-70P01814 119 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 BRS3P32247 399 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 RPL27AP46776 148 aaKnown RBP7.62□□□□□ -1.19
SSR3-201ENST00000265044 BTN1A1Q13410 526 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 ACOT6Q3I5F7 207 aaPredicted RBP7.62□□□□□ -1.19
SSR3-201ENST00000265044 PDPNQ86YL7 162 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 LFNGQ8NES3 379 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 RXFP4Q8TDU9 374 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 COA4Q9NYJ1 87 aa7.62□□□□□ -1.19
SSR3-201ENST00000265044 MAP1AP78559 2803 aaPredicted RBP7.61□□□□□ -1.19
SSR3-201ENST00000265044 A0A1W2PN81 502 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 DANCRP0C864 163 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 COL8A1P27658 744 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 CHRNA7P36544 502 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 LGALS7P47929 136 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 HLA-DRB5Q30154 266 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 SOHLH1Q5JUK2 328 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 SUN5Q8TC36 379 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 TAF15Q92804 592 aaKnown RBP eCLIP7.61□□□□□ -1.19
SSR3-201ENST00000265044 ACTR3CQ9C0K3 210 aaPredicted RBP7.61□□□□□ -1.19
SSR3-201ENST00000265044 RFNGQ9Y644 331 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 C22orf46C9J442 243 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 RNASEK-C17orf49H0YIS7 233 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 TRIM77I1YAP6 450 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 GUK1Q16774 197 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 BPIFCQ8NFQ6 507 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 OR10G4Q8NGN3 311 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 OR10G9Q8NGN4 311 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 OR10G7Q8NGN6 311 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 BARX1Q9HBU1 254 aaPredicted RBP7.61□□□□□ -1.19
SSR3-201ENST00000265044 KCNIP2Q9NS61 270 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 IGKV1D-33P01593 117 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 IGKV1-33P01594 117 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 MBP02144 154 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 OR5G3P0C626 314 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 LYL1P12980 280 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 C5orf30Q96GV9 206 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
SSR3-201ENST00000265044 C15orf61A6NNL5 157 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 ITGB1BP1O14713 200 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 TIMM23O14925 209 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
SSR3-201ENST00000265044 CA2P00918 260 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 SNRNP70P08621 437 aaKnown RBP7.6□□□□□ -1.19
SSR3-201ENST00000265044 C10orf55Q5SWW7 151 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 RBMS3Q6XE24 437 aaKnown RBP7.6□□□□□ -1.19
SSR3-201ENST00000265044 IL34Q6ZMJ4 242 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 HSD17B13Q7Z5P4 300 aaPredicted RBP7.6□□□□□ -1.19
SSR3-201ENST00000265044 SVBPQ8N300 66 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 NRGNQ92686 78 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 C20orf24Q9BUV8 137 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 UNKLQ9H9P5 680 aaKnown RBP7.6□□□□□ -1.19
SSR3-201ENST00000265044 MAP1LC3B2A6NCE7 125 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 H0YJW9 148 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 UPK2O00526 184 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 TUSC1Q2TAM9 212 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 NABP2Q9BQ15 211 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 MAP1LC3BQ9GZQ8 125 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 ARV1Q9H2C2 271 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 NPVFQ9HCQ7 196 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 RPS10P5Q9NQ39 176 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 BUB1B-PAK6H3BSN5 160 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 PROP1O75360 226 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 PAX5Q02548 391 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 TFF3Q07654 80 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 OR10W1Q8NGF6 305 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 OR5B3Q8NH48 314 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 FAM216AQ8WUB2 273 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 TMEM204Q9BSN7 226 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 PARP11Q9NR21 331 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 TNFRSF19Q9NS68 423 aa7.6□□□□□ -1.19
SSR3-201ENST00000265044 KALRNO60229 2985 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 BTBD17A6NE02 478 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 RRHO14718 337 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 UBE2G2P60604 165 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 RELBQ01201 579 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 TEPPQ6URK8 271 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 TCF23Q7RTU1 214 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 VMO1Q7Z5L0 202 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 DTX2Q86UW9 622 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 CLDND2Q8NHS1 167 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 GINS3Q9BRX5 216 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 DOK5Q9P104 306 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 IGSF10Q6WRI0 2623 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 MYO9AB2RTY4 2548 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 IGHV1-3A0A0C4DH29 117 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 OR7C2O60412 319 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 CGB3P0DN86 165 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 CGB7P0DN87 165 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 TMEM11P17152 192 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 PSMB3P49720 205 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 TNFRSF14Q92956 283 aa7.59□□□□□ -1.19
SSR3-201ENST00000265044 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
SSR3-201ENST00000265044 HCFC1P51610 2035 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms