RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 F2RP25116 425 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 HRH1P35367 487 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 OR2B8PP59922 312 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 CTF1Q16619 201 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 NAA50Q9GZZ1 169 aaKnown RBP12.24□□□□□ -0.45
USE1-201ENST00000263897 S1PR2O95136 353 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 NDUFB8O95169 186 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 FGF2P09038 288 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 FRMD6-AS1P0C7T7 363 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 SMIM18P0DKX4 95 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
USE1-201ENST00000263897 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
USE1-201ENST00000263897 MZT2AQ6P582 158 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 SNX29P2Q8IUI4 249 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 CMTM1Q8IZ96 169 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
USE1-201ENST00000263897 GPR31O00270 319 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 GGCTO75223 188 aaKnown RBP12.22□□□□□ -0.45
USE1-201ENST00000263897 GABARAPO95166 117 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 RLN1P04808 185 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 REG1AP05451 166 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 LPAR6P43657 344 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 TSPAN5P62079 268 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 LPCAT3Q6P1A2 487 aa12.22□□□□□ -0.45
USE1-201ENST00000263897 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
USE1-201ENST00000263897 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 PPP5D1E7EU14 171 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 OR2C1O95371 312 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 DEFA4P12838 97 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 RPA2P15927 270 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 ZNF182P17025 639 aaPredicted RBP12.21□□□□□ -0.45
USE1-201ENST00000263897 ZNF585BQ52M93 769 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 GPR107Q5VW38 600 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 ADAMTSL5Q6ZMM2 481 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 CADM3Q8N126 398 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 FCAMRQ8WWV6 532 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
USE1-201ENST00000263897 FXYD6Q9H0Q3 95 aa12.21□□□□□ -0.45
USE1-201ENST00000263897 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 A8MZ25 164 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 KRASP01116 189 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 IGHV3-23P01764 117 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 HLA-AP01891 365 aaKnown RBP12.2□□□□□ -0.46
USE1-201ENST00000263897 IGHV4-30-4P0DP06 118 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 RCVRNP35243 200 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 ERVK-16P61578 105 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 LCN12Q6JVE5 192 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 GPHB5Q86YW7 130 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 Q8N402 240 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 AP3S1Q92572 193 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 EEF1AKMT3Q96AZ1 226 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 THAP7Q9BT49 309 aaPredicted RBP12.2□□□□□ -0.46
USE1-201ENST00000263897 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
USE1-201ENST00000263897 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 S4R3C0 116 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 NBEAL2Q6ZNJ1 2754 aa12.2□□□□□ -0.46
USE1-201ENST00000263897 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 LGALS9O00182 355 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 ARL3P36405 182 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 UCP3P55916 312 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 PHLDA2Q53GA4 152 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 OR2K2Q8NGT1 345 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 CXorf58Q96LI9 332 aa12.19□□□□□ -0.46
USE1-201ENST00000263897 TRBV7-1A0A0A6YYK4 115 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 TPPPO94811 219 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 CLEC3BP05452 202 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 S100GP29377 79 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 G6PCP35575 357 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 ALDH3B2P48448 385 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 THOC7Q6I9Y2 204 aaKnown RBP12.18□□□□□ -0.46
USE1-201ENST00000263897 HSD17B13Q7Z5P4 300 aaPredicted RBP12.18□□□□□ -0.46
USE1-201ENST00000263897 OR1L8Q8NGR8 309 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
USE1-201ENST00000263897 NDUFA4L2Q9NRX3 87 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 FAM212BQ9NTI7 297 aaPredicted RBP12.18□□□□□ -0.46
USE1-201ENST00000263897 THYN1Q9P016 225 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 KLK11Q9UBX7 282 aa12.18□□□□□ -0.46
USE1-201ENST00000263897 MFSD2BA6NFX1 497 aa12.17□□□□□ -0.46
USE1-201ENST00000263897 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
USE1-201ENST00000263897 SNAPC5O75971 98 aa12.17□□□□□ -0.46
USE1-201ENST00000263897 SERPINE2P07093 398 aa12.17□□□□□ -0.46
USE1-201ENST00000263897 OR13C7P0DN81 318 aa12.17□□□□□ -0.46
USE1-201ENST00000263897 FOLR2P14207 255 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms