RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TRAT1Q6PIZ9 186 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 UNQ6494/PRO21346Q6UXR6 183 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 RNF138Q8WVD3 245 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 IL3RAP26951 378 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 UBE2L3P68036 154 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 SPATA31B1PQ5VZV4 182 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 SLC24A4Q8NFF2 622 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 LYPD6BQ8NI32 183 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 TMEM68Q96MH6 324 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 COX7A2P2O60397 106 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 GZMHP20718 246 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 RTL8BQ17RB0 113 aa13.52□□□□□ -0.25
PDZRN3-201ENST00000263666 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 HELTA6NFD8 242 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 APOA2P02652 100 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 COLCA1Q6ZS62 124 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 BHLHA15Q7RTS1 189 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 ZNF835Q9Y2P0 537 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 LRP4O75096 1905 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 REG1AP05451 166 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 NUBP1P53384 320 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 MISP3Q96FF7 219 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 OR6C3Q9NZP0 311 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 ZNRD1Q9P1U0 126 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 IGKV3D-15A0A087WSY6 115 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 RAB29O14966 203 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 IGFBP2P18065 325 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 EGLN1Q9GZT9 426 aa13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 TLN1Q9Y490 2541 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-201ENST00000263666 UBE2G1P62253 170 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 SEBOXQ9HB31 216 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 KCNIP2Q9NS61 270 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 TNFSF10P50591 281 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 C21orf62-AS1Q17RA5 79 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 WDR82Q6UXN9 313 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 KDF1Q8NAX2 398 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 TMEM250H0YL14 139 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 PDE6DO43924 150 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 HSBP1O75506 76 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 WISP2O76076 250 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 HPRT1P00492 218 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 GNB2P62879 340 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 STPG3Q8N7X2 389 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 MBD3L1Q8WWY6 194 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 NPVFQ9HCQ7 196 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 FREM2Q5SZK8 3169 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 CXorf1O96002 111 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 OR4A8P0C604 315 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 REC114Q7Z4M0 266 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 COQ2Q96H96 371 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
PDZRN3-201ENST00000263666 MLNRO43193 412 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 RANP62826 216 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 ZBTB34Q8NCN2 500 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 C14orf144Q96I85 54 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 MRPL18Q9H0U6 180 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 OR51B2Q9Y5P1 312 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 CA2P00918 260 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 SPCS3P61009 180 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 PLA2G2CQ5R387 149 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 FAM216BQ8N7L0 139 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 ADH4P08319 380 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 TCTAP57738 103 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 MOB3BQ86TA1 216 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 HARBI1Q96MB7 349 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 NAGKQ9UJ70 344 aa13.49□□□□□ -0.25
PDZRN3-201ENST00000263666 DSPP15924 2871 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 TMEM210A6NLX4 147 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 TMEM11P17152 192 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 HCP5Q6MZN7 132 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 ATRXP46100 2492 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 COL8A2P25067 703 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 CHRNB4P30926 498 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 GABRA6Q16445 453 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 C22orf15Q8WYQ4 148 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 MIR17HGQ75NE6 70 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 OR5AU1Q8NGC0 362 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 OCC1Q8TAD7 63 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 RNASE7Q9H1E1 156 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
PDZRN3-201ENST00000263666 M0R143 59 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 CSN3P07498 182 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 ZNF137PP52743 207 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 TAS2R45P59539 299 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 SCRT1Q9BWW7 348 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 IGF2RP11717 2491 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 IFITM10A6NMD0 228 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms