RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 CLEC7AQ9BXN2 247 aa9.11□□□□□ -0.95
CD44-201ENST00000263398 RNF115Q9Y4L5 304 aa9.11□□□□□ -0.95
CD44-201ENST00000263398 CACNA1HO95180 2353 aa9.11□□□□□ -0.95
CD44-201ENST00000263398 A0A1W2PS18 150 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 IL6RP08887 468 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 RPL39P5Q59GN2 51 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 FDCSPQ8NFU4 85 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 ZCCHC14Q8WYQ9 949 aaKnown RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 CREBBPQ92793 2442 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 SIP14410 1827 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 EFEMP2O95967 443 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 HINT1P49773 126 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 C1orf162Q8NEQ5 155 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 C16orf92Q96LL3 132 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 RTN4RQ9BZR6 473 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 A0A087WWC5 75 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 LOC102723996A0A087X1L8 192 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 C17orf98A8MV24 154 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 GPX4P36969 197 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 PSG7Q13046 419 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 PAQR4Q8N4S7 273 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.1□□□□□ -0.95
CD44-201ENST00000263398 OR10J6PQ8NGY7 276 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 H0YIZ8 118 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 WBP1Q96G27 269 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 GUCD1Q96NT3 240 aa9.1□□□□□ -0.95
CD44-201ENST00000263398 LNP1A1A4G5 178 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 F8VVB4 439 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 F8VWA3 439 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 BTF3P20290 206 aaKnown RBP9.09□□□□□ -0.95
CD44-201ENST00000263398 CBLN1P23435 193 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 RAB9AP51151 201 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 ARF6P62330 175 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 GTF3AQ92664 365 aaKnown RBP9.09□□□□□ -0.95
CD44-201ENST00000263398 GFI1Q99684 422 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 GPR179Q6PRD1 2367 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 TRBV6-7A0A0A0MS04 114 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 OR4C46A6NHA9 309 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 M0R3E3 92 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 TCF24Q7RTU0 167 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 MUC15Q8N387 334 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 REG1AP05451 166 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 LIPFP07098 398 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 RNF224P0DH78 156 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 PSG9Q00887 426 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 OR13A1Q8NGR1 328 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
CD44-201ENST00000263398 RALYQ9UKM9 306 aaKnown RBP9.09□□□□□ -0.95
CD44-201ENST00000263398 VWA8A3KMH1 1905 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 A0A0G2JMM0 328 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 A0A1W2PPB8 328 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 A0A1W2PRS3 328 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 IGHV3-48P01763 117 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 UMODP07911 640 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 PF4V1P10720 104 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 CLEC2AQ6UVW9 174 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 ZNF502Q8TBZ5 544 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 IFI27L2Q9H2X8 130 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.96
CD44-201ENST00000263398 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 CLDND2Q8NHS1 167 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 TMEM70Q9BUB7 260 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 SSBP3Q9BWW4 388 aaPredicted RBP9.08□□□□□ -0.96
CD44-201ENST00000263398 SDF2L1Q9HCN8 221 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 ZNF319Q9P2F9 582 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 TM4SF5O14894 197 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 FGF16O43320 207 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 C2orf83Q53S99 150 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 DYNLRB2Q8TF09 96 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 B9A039 149 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 H3BTX0 84 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 GDF9O60383 454 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 SOD3P08294 240 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 NBEAP1P0C6P0 100 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 MST1P26927 711 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 OR4A47Q6IF82 309 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
CD44-201ENST00000263398 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 A6NJY4 79 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 NPIPB11E5RHQ5 1161 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 SIAH2O43255 324 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 TM4SF20Q53R12 229 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 EBLN2Q6P2I7 272 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 REC114Q7Z4M0 266 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 EAF1Q96JC9 268 aaPredicted RBP9.07□□□□□ -0.96
CD44-201ENST00000263398 C18orf12Q96KH6 178 aa9.07□□□□□ -0.96
CD44-201ENST00000263398 NEU1Q99519 415 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms