RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 FXYD3Q14802 87 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 ZBTB34Q8NCN2 500 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
ZNF541-201ENST00000263351 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
ZNF541-201ENST00000263351 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
ZNF541-201ENST00000263351 MDFIC2A0A1B0GVS7 189 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 VENTXO95231 258 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 KITLGP21583 273 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 KIR2DL2P43627 348 aaPredicted RBP13.63□□□□□ -0.23
ZNF541-201ENST00000263351 CCL11P51671 97 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 LURAP1Q96LR2 239 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 CXXC4Q9H2H0 198 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 SERF1AO75920 110 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 IL6RP08887 468 aaPredicted RBP13.63□□□□□ -0.23
ZNF541-201ENST00000263351 CD59P13987 128 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 DNLZQ5SXM8 178 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 HES3Q5TGS1 186 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 DOLPP1Q86YN1 238 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 OR4P4Q8NGL7 312 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 GMPPAQ96IJ6 420 aaPredicted RBP13.63□□□□□ -0.23
ZNF541-201ENST00000263351 HSD17B10Q99714 261 aaKnown RBP13.63□□□□□ -0.23
ZNF541-201ENST00000263351 IFI27L2Q9H2X8 130 aa13.63□□□□□ -0.23
ZNF541-201ENST00000263351 STAG3L2P0CL84 134 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 STAG3L3P0CL85 134 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 IER3P46695 156 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 GNG10P50151 68 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 SPCS3P61009 180 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 RAB4BP61018 213 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 EFNB3Q15768 340 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 NHLRC2Q8NBF2 726 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 DEFB108BQ8NET1 73 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 FAM103A1Q9BTL3 118 aaKnown RBP13.62□□□□□ -0.23
ZNF541-201ENST00000263351 NAGKQ9UJ70 344 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 TCF19Q9Y242 345 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 TPRP12270 2363 aaKnown RBP13.62□□□□□ -0.23
ZNF541-201ENST00000263351 TANC2Q9HCD6 1990 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 PIGBOS1A0A0B4J2F0 54 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 SPINT2O43291 252 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 IGHV3-48P01763 117 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 OR10J4P0C629 311 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 ZNF90Q03938 601 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 ZPBPQ9BS86 351 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
ZNF541-201ENST00000263351 KCNIP2Q9NS61 270 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 DCAF16Q9NXF7 216 aa13.62□□□□□ -0.23
ZNF541-201ENST00000263351 TMEM210A6NLX4 147 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 CDX4O14627 284 aaPredicted RBP13.61□□□□□ -0.23
ZNF541-201ENST00000263351 TMPRSS2O15393 492 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 PDE6DO43924 150 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 MMP23AO75900 390 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 LOXL3P58215 753 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 FAM90A1Q86YD7 464 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 CLCF1Q9UBD9 225 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
ZNF541-201ENST00000263351 IGKV3-15P01624 115 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 GCHFRP30047 84 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 SSTP61278 116 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 NUTF2P61970 127 aaKnown RBP13.61□□□□□ -0.23
ZNF541-201ENST00000263351 SMIM21Q3B7S5 101 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 Q6ZT83 130 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 MOGAT3Q86VF5 341 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 GCSAMQ8N6F7 178 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 OR10G8Q8NGN5 311 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 NOL4LQ96MY1 436 aaPredicted RBP13.61□□□□□ -0.23
ZNF541-201ENST00000263351 TP53TG5Q9Y2B4 290 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 PPIAL4AQ9Y536 164 aa13.61□□□□□ -0.23
ZNF541-201ENST00000263351 C21orf140B9A014 251 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 CA2P00918 260 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 IQCJQ1A5X6 159 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
ZNF541-201ENST00000263351 RPRMLQ8N4K4 120 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 CMTM2Q8TAZ6 248 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 IGHV2OR16-5A0A0B4J2B6 119 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 SPRY3O43610 288 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 DBX2Q6ZNG2 339 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 OR8I2Q8N0Y5 310 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 FDCSPQ8NFU4 85 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 HSPB9Q9BQS6 159 aa13.6□□□□□ -0.23
ZNF541-201ENST00000263351 MRPL18Q9H0U6 180 aaKnown RBP13.6□□□□□ -0.23
ZNF541-201ENST00000263351 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.59□□□□□ -0.23
ZNF541-201ENST00000263351 HPRT1P00492 218 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 CRYBB3P26998 211 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 OPRK1P41145 380 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 ZNF83P51522 516 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 ZNF124Q15973 351 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 BATFQ16520 125 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 VN1R17PQ8TDU5 208 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms