RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 CECR9P0C854 216 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 LINC01551Q86U37 167 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 OR4P4Q8NGL7 312 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 TMEM170AQ8WVE7 144 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 FAM103A1Q9BTL3 118 aaKnown RBP10.52□□□□□ -0.73
LIG1-201ENST00000263274 HCFC1P51610 2035 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 TNRC6AQ8NDV7 1962 aaKnown RBP10.51□□□□□ -0.73
LIG1-201ENST00000263274 ATMQ13315 3056 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 IRF2P14316 349 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 CBLN1P23435 193 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 BAGE3Q86Y29 109 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 BAGE2Q86Y30 109 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 LYG1Q8N1E2 194 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 SERTAD4Q9NUC0 356 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
LIG1-201ENST00000263274 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 PCSK5Q92824 1860 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 TMEM210A6NLX4 147 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 INO80CQ6PI98 192 aaPredicted RBP10.51□□□□□ -0.73
LIG1-201ENST00000263274 MOGAT3Q86VF5 341 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 CD177Q8N6Q3 437 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 LRFN3Q9BTN0 628 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 TUBG2Q9NRH3 451 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 M0R1B8 84 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 CIDEAO60543 219 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 TCL1AP56279 114 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 MDS2Q8NDY4 140 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 OR10G8Q8NGN5 311 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 ZNF318Q5VUA4 2279 aa10.51□□□□□ -0.73
LIG1-201ENST00000263274 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 C11orf53Q8IXP5 236 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 CISD2Q8N5K1 135 aaKnown RBP10.5□□□□□ -0.73
LIG1-201ENST00000263274 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 DNAJC4Q9NNZ3 241 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 9.8
LIG1-201ENST00000263274 PDE6DO43924 150 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 GATA2P23769 480 aaPredicted RBP10.5□□□□□ -0.73
LIG1-201ENST00000263274 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 TOMM20LQ6UXN7 152 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 TGIF2LYQ8IUE0 185 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 OCC1Q8TAD7 63 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 SFRP2Q96HF1 295 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 ACACAQ13085 2346 aa10.5□□□□□ -0.73
LIG1-201ENST00000263274 OR7C2O60412 319 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 SP9P0CG40 484 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 TDGF1P13385 188 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 HTD2P86397 168 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 PPP1R35Q8TAP8 253 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 FAM216AQ8WUB2 273 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 ACY3Q96HD9 319 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 TBX15Q96SF7 602 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 PLEKHA3Q9HB20 300 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 PARD6AQ9NPB6 346 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 WDR83OSQ9Y284 106 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 ZNF292O60281 2723 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 FOXH1O75593 365 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 HPRT1P00492 218 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 MGST1P10620 155 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 PAX1P15863 534 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 SRP14P37108 136 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 IER3P46695 156 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 RPL31P62899 125 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 MRPS11P82912 194 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 Q6ZT83 130 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 C9orf106Q8NAJ2 232 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 TCF19Q9Y242 345 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 NUPR1O60356 82 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 LINC00614P0C842 121 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 RAB31Q13636 194 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 FDCSPQ8NFU4 85 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 LPAR2Q9HBW0 351 aa10.49□□□□□ -0.73
LIG1-201ENST00000263274 SEPSECSQ9HD40 501 aaKnown RBP10.49□□□□□ -0.73
LIG1-201ENST00000263274 TNFSF10P50591 281 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 UTF1Q5T230 341 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 UHRF2Q96PU4 802 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 SPRY4Q9C004 299 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 FCN1O00602 326 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 ADH4P08319 380 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 OR10J4P0C629 311 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 ADMP35318 185 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 PSG5Q15238 335 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 ACSF3Q4G176 576 aaPredicted RBP10.48□□□□□ -0.73
LIG1-201ENST00000263274 RND1Q92730 232 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 MGST2Q99735 147 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 CBY3A6NI87 242 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 PROP1O75360 226 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 CGAP01215 116 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 FXYD3Q14802 87 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms