RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 OR2Z1Q8NG97 314 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 SLC35E1Q96K37 410 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 HEATR1Q9H583 2144 aaKnown RBP18.72■□□□□ 0.59
MCF2L-201ENST00000261963 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-201ENST00000261963 CADP27708 2225 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 ESDP10768 282 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 COTL1Q14019 142 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 OR5AU1Q8NGC0 362 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 TP53TG3Q9ULZ0 132 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 PSG11Q9UQ72 335 aa18.72■□□□□ 0.59
MCF2L-201ENST00000261963 TMPRSS2O15393 492 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 CLDN14O95500 239 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 FFAR4Q5NUL3 377 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 ZNF318Q5VUA4 2279 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 IGKV1D-17A0A075B6S4 117 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 EDDM3AQ14507 147 aa18.71■□□□□ 0.59
MCF2L-201ENST00000261963 PMS2P5A8MQ11 134 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 SRRM5B3KS81 715 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 RAB29O14966 203 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 C1QTNF9P0C862 333 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 C1orf174Q8IYL3 243 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 ZDHHC16Q969W1 377 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 CIB3Q96Q77 187 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-201ENST00000261963 C20orf202A1L168 122 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 PDE6DO43924 150 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 SERF1AO75920 110 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 HTD2P86397 168 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 SPRNQ5BIV9 151 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 SAPCD1Q5SSQ6 148 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 ZADH2Q8N4Q0 377 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 TCTEX1D1Q8N7M0 179 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 DUSP13Q9UII6 198 aa18.7■□□□□ 0.58
MCF2L-201ENST00000261963 SPINT2O43291 252 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 ZG16O60844 167 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 CRISP2P16562 243 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 ZNF83P51522 516 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 LINC00310P59036 64 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 ATP6V1FQ16864 119 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 SFRP2Q96HF1 295 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 PROP1O75360 226 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 GNB1P62873 340 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 LTC4SQ16873 150 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 ALKBH2Q6NS38 261 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 ZNF474Q6S9Z5 364 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-201ENST00000261963 RPRMLQ8N4K4 120 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 OR4B1Q8NGF8 309 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 TMEM147Q9BVK8 224 aa18.69■□□□□ 0.58
MCF2L-201ENST00000261963 MDFIC2A0A1B0GVS7 189 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 MZT1Q08AG7 82 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 HSD17B10Q99714 261 aaKnown RBP18.68■□□□□ 0.58
MCF2L-201ENST00000261963 ADH4P08319 380 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 MMDQ15546 238 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 H2BFWTQ7Z2G1 175 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 GCSAMQ8N6F7 178 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 SAMD10Q9BYL1 202 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 GAL3ST2Q9H3Q3 398 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 FAM215AQ9Y5M1 114 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 PTPRBP23467 1997 aa18.68■□□□□ 0.58
MCF2L-201ENST00000261963 ZNF292O60281 2723 aa18.67■□□□□ 0.58
MCF2L-201ENST00000261963 DOCK11Q5JSL3 2073 aa18.67■□□□□ 0.58
MCF2L-201ENST00000261963 CRYAAP02489 173 aa18.67■□□□□ 0.58
MCF2L-201ENST00000261963 COMPP49747 757 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-201ENST00000261963 RBX1P62877 108 aa18.67■□□□□ 0.58
MCF2L-201ENST00000261963 TRAT1Q6PIZ9 186 aa18.67■□□□□ 0.58
MCF2L-201ENST00000261963 NDUFB4O95168 129 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 SPINK9Q5DT21 86 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 C22orf15Q8WYQ4 148 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 PLPPR2Q96GM1 343 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 YLPM1P49750 1951 aaKnown RBP18.66■□□□□ 0.58
MCF2L-201ENST00000261963 IGHV3OR15-7A0A075B7D8 119 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 CFHR2P36980 270 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 RPS16P62249 146 aaKnown RBP18.66■□□□□ 0.58
MCF2L-201ENST00000261963 BAGE3Q86Y29 109 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 BAGE2Q86Y30 109 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 ZNF709Q8N972 641 aa18.66■□□□□ 0.58
MCF2L-201ENST00000261963 RNASE8Q8TDE3 154 aaKnown RBP18.66■□□□□ 0.58
MCF2L-201ENST00000261963 F6UZH7 168 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 M0R1B8 84 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 LEMD1Q68G75 181 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 IGFL3Q6UXB1 125 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 ZNF114Q8NC26 417 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 OR2V2Q96R30 315 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 DERL1Q9BUN8 251 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 IGHV3-13P01766 116 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 CBLN1P23435 193 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 DUTP33316 252 aaKnown RBP18.65■□□□□ 0.58
MCF2L-201ENST00000261963 PTTG1IPP53801 180 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 FAM90A1Q86YD7 464 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 MRPL18Q9H0U6 180 aaKnown RBP18.65■□□□□ 0.58
MCF2L-201ENST00000261963 SLC45A2Q9UMX9 530 aa18.65■□□□□ 0.58
MCF2L-201ENST00000261963 PGPEP1LA6NFU8 196 aa18.64■□□□□ 0.58
MCF2L-201ENST00000261963 RBFOX2O43251 390 aaKnown RBP eCLIP18.64■□□□□ 0.584e-6■■□□□ 14
MCF2L-201ENST00000261963 TIMM23BQ5SRD1 257 aa18.64■□□□□ 0.58
MCF2L-201ENST00000261963 MGAQ8IWI9 3026 aa18.64■□□□□ 0.57
MCF2L-201ENST00000261963 NDUFB8O95169 186 aa18.64■□□□□ 0.57
MCF2L-201ENST00000261963 GPR12P47775 334 aa18.64■□□□□ 0.57
MCF2L-201ENST00000261963 ATP5G3P48201 142 aa18.64■□□□□ 0.57
MCF2L-201ENST00000261963 CDC34P49427 236 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-201ENST00000261963 TFF3Q07654 80 aa18.64■□□□□ 0.57
MCF2L-201ENST00000261963 CR1LQ2VPA4 569 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms