RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 ST8SIA1Q92185 356 aa10.56□□□□□ -0.72
FOXN3-201ENST00000261302 FER1L6-AS2Q96M78 137 aa10.56□□□□□ -0.72
FOXN3-201ENST00000261302 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
FOXN3-201ENST00000261302 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.55□□□□□ -0.72
FOXN3-201ENST00000261302 IGKV3-11P04433 115 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 STAG3L2P0CL84 134 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 HTR1DP28221 377 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 RAC3P60763 192 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 PCSK4Q6UW60 755 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 OR2Z1Q8NG97 314 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 OR2W1Q9Y3N9 320 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 ATP23Q9Y6H3 246 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 NCOA6Q14686 2063 aaPredicted RBP10.55□□□□□ -0.72
FOXN3-201ENST00000261302 TEX48A0A1B0GUV7 120 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 SMIM27A0A1W2PRY6 76 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A10PA6NDY2 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A18PA6NE21 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A16PA6NEW6 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A20PA6NIJ5 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A8PA6NJQ4 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A7PA6NKC0 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A22PA8MWA6 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A12PA8MX19 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A5PA8MXJ8 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A23PA8MXZ1 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 H3BUT2 72 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 TM4SF5O14894 197 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 AGFG2O95081 481 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A15PP0C7V4 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A13PP0C7W8 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A14PP0C7W9 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FAM90A24PP0C7X0 464 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 FTH1P19P0C7X4 201 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 ARL14EPLP0DKL9 152 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 PLCXD2Q0VAA5 305 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 MTURNQ8N3F0 131 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 GJC3Q8NFK1 279 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 VSTM2AQ8TAG5 236 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 MRAP2Q96G30 205 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 PPP1R3CQ9UQK1 317 aa10.55□□□□□ -0.72
FOXN3-201ENST00000261302 SPTY2D1-AS1A0A0U1RR47 76 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 A6NDN8 102 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 M0R135 149 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 CXorf1O96002 111 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 SLC35B1P78383 322 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 RAB31Q13636 194 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 TMEM42Q69YG0 159 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 MRPL21Q7Z2W9 205 aaKnown RBP10.54□□□□□ -0.72
FOXN3-201ENST00000261302 OR2T6Q8NHC8 308 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 ZNF799Q96GE5 643 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 WDR54Q9H977 334 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 C19orf25Q9UFG5 118 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-201ENST00000261302 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
FOXN3-201ENST00000261302 A0A0G2JLM5 398 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-201ENST00000261302 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 RNASEKQ6P5S7 137 aaKnown RBP10.54□□□□□ -0.72
FOXN3-201ENST00000261302 CCL4L1Q8NHW4 92 aa10.54□□□□□ -0.72
FOXN3-201ENST00000261302 ZNF292O60281 2723 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 IZUMO1RA6ND01 250 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 COX8AP10176 69 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 HIST1H1EP10412 219 aaKnown RBP10.53□□□□□ -0.72
FOXN3-201ENST00000261302 CD59P13987 128 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 CARD17Q5XLA6 110 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 HRASLS2Q9NWW9 162 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 PLEK2Q9NYT0 353 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 TSSC4Q9Y5U2 329 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-201ENST00000261302 ISLRO14498 428 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 TNFSF11O14788 317 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 RHBDL1O75783 438 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 TSPAN13O95857 204 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 ZNF331Q9NQX6 463 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-201ENST00000261302 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
FOXN3-201ENST00000261302 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 K7EQM0 130 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 RRHO14718 337 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 HBZP02008 142 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 TCL1AP56279 114 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 FBXW4P57775 412 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 RPL24P83731 157 aaKnown RBP10.52□□□□□ -0.72
FOXN3-201ENST00000261302 COLCA1Q6ZS62 124 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 SHISA6Q6ZSJ9 500 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 PIP4P1Q86T03 277 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 BPIFA4PQ86YQ2 179 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 SAP25Q8TEE9 199 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 PERPQ96FX8 193 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.72
FOXN3-201ENST00000261302 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 SELENOKQ9Y6D0 94 aa10.52□□□□□ -0.72
FOXN3-201ENST00000261302 PI4KAP42356 2102 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms