RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 OR8B2Q96RD0 313 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 IFI27L2Q9H2X8 130 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 COA3Q9Y2R0 106 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 hDV102S1A0JD36 115 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 DDTLA6NHG4 134 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 CRLF1O75462 422 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 CPSF4O95639 269 aaKnown RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 PFN3P60673 137 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 HSPE1P61604 102 aaKnown RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 Q5XG85 94 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 TRPT1Q86TN4 253 aaKnown RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 DTX2Q86UW9 622 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 OR10J6PQ8NGY7 276 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 LSM10Q969L4 123 aaKnown RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 PRORYQ9H606 182 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 BEX4Q9NWD9 120 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 TRAV1-1A0A0B4J248 108 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 OOSP1A8MZH6 123 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FXYD6P3P58550 94 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 RPS11P62280 158 aaKnown RBP eCLIP6.44□□□□□ -1.38
GPNMB-201ENST00000258733 RAE1P78406 368 aaKnown RBP6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FKBP1CQ5VVH2 108 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 NEURL3Q96EH8 262 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 JPT2Q9H910 190 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 CKLFQ9UBR5 152 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 NSG2Q9Y328 171 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 DYSFO75923 2080 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 COL11A1P12107 1806 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM262E9PQX1 116 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FCGR3BO75015 233 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 PSMB3P49720 205 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 CCL11P51671 97 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 MRPL14Q6P1L8 145 aaKnown RBP6.44□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF584Q8IVC4 421 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF721Q8TF20 911 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 GTSF1Q8WW33 167 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 CASP8AP2Q9UKL3 1982 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 PLXNA3P51805 1871 aa6.44□□□□□ -1.38
GPNMB-201ENST00000258733 FAM181BA6NEQ2 426 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PIN1P1O15428 100 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ANGPTL7O43827 346 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FGF1P05230 155 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF20P17024 532 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 NMUP48645 174 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 IHHQ14623 411 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 EBLN2Q6P2I7 272 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 Q6ZSR3 168 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 EXOC3-AS1Q8N2X6 119 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ZPLD1Q8TCW7 415 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ACER1Q8TDN7 264 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 TSKUQ8WUA8 353 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM222Q9H0R3 208 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PRO0461Q9UI25 63 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A18PA6NE21 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A16PA6NEW6 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A7PA6NKC0 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A9PA6NNJ1 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A22PA8MWA6 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A12PA8MX19 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A5PA8MXJ8 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A23PA8MXZ1 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 H3BMG7 143 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PITX3O75364 302 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 RBP4P02753 201 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A15PP0C7V4 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A14PP0C7W9 464 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 SMIM11AP58511 58 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 KLRB1Q12918 225 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PCOLCEQ15113 449 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 VWC2Q2TAL6 325 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 CT83Q5H943 113 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FAM19A1Q7Z5A9 133 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 GATD1Q8NB37 220 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 OR4X2Q8NGF9 303 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 RDH5Q92781 318 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ADAT3Q96EY9 351 aaPredicted RBP6.43□□□□□ -1.38
GPNMB-201ENST00000258733 TIMD4Q96H15 378 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 C20orf173Q96LM9 149 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PRR13Q9NZ81 148 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FCN1O00602 326 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 PLPP1O14494 284 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 COX8AP10176 69 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 CNTFRP26992 372 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 RPL31P62899 125 aaKnown RBP6.43□□□□□ -1.38
GPNMB-201ENST00000258733 CDK5R1Q15078 307 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 C9orf153Q5TBE3 101 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 LCN10Q6JVE6 187 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 STAC2Q6ZMT1 411 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 GAPTQ8N292 157 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF665Q9H7R5 613 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 NAA60Q9H7X0 242 aa6.43□□□□□ -1.38
GPNMB-201ENST00000258733 FZR1Q9UM11 496 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms