RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
PTPN12-201ENST00000248594 CEACAM16Q2WEN9 425 aa15.31■□□□□ 0.04
PTPN12-201ENST00000248594 MRPL21Q7Z2W9 205 aaKnown RBP15.31■□□□□ 0.04
PTPN12-201ENST00000248594 SFXN3Q9BWM7 321 aa15.31■□□□□ 0.04
PTPN12-201ENST00000248594 FAM231BA6NCW3 169 aa15.31■□□□□ 0.04
PTPN12-201ENST00000248594 TIAF1O95411 115 aa15.31■□□□□ 0.04
PTPN12-201ENST00000248594 DAZAP2Q15038 168 aaPredicted RBP15.31■□□□□ 0.04
PTPN12-201ENST00000248594 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.31■□□□□ 0.04
PTPN12-201ENST00000248594 WDR73Q6P4I2 378 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 PNKDQ8N490 385 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 RFESDQ8TAC1 157 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 LSM10Q969L4 123 aaKnown RBP15.3■□□□□ 0.04
PTPN12-201ENST00000248594 GNB1LQ9BYB4 327 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 CTSSP25774 331 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 CLDN15P56746 228 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 NHLH1Q02575 133 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 PSG5Q15238 335 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 C18orf32Q8TCD1 76 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 NEURL1O76050 574 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 CELA2AP08217 269 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 VKORC1L1Q8N0U8 176 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 HS3ST3A1Q9Y663 406 aa15.3■□□□□ 0.04
PTPN12-201ENST00000248594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 C22orf46C9J442 243 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 ZNF137PP52743 207 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 SPATA46Q5T0L3 261 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 NINJ1Q92982 152 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 ZNF355PQ9NSJ1 428 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 V9GYV3 84 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 C5orf49A4QMS7 147 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 ZNF138P52744 262 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 HOXA4Q00056 320 aaPredicted RBP15.29■□□□□ 0.04
PTPN12-201ENST00000248594 STRADBQ9C0K7 418 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 THYN1Q9P016 225 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 hCG_38984A0A1B0GV85 526 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
PTPN12-201ENST00000248594 ABHD12Q8N2K0 398 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 FAM168AQ92567 244 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 C10orf35Q96D05 121 aa15.29■□□□□ 0.04
PTPN12-201ENST00000248594 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 PLP1P60201 277 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 IBA57Q5T440 356 aaKnown RBP15.28■□□□□ 0.04
PTPN12-201ENST00000248594 FAM216AQ8WUB2 273 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 SF3B5Q9BWJ5 86 aaKnown RBP15.28■□□□□ 0.04
PTPN12-201ENST00000248594 LRRC30A6NM36 301 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 AMY1AP04745 511 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 LINC00869P0C866 280 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 GCHFRP30047 84 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 CEBPDP49716 269 aaPredicted RBP15.28■□□□□ 0.04
PTPN12-201ENST00000248594 DCAF12Q5T6F0 453 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 CT55Q8WUE5 264 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 LINC00479Q96M42 142 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 TMEM70Q9BUB7 260 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 DEFB126Q9BYW3 111 aa15.28■□□□□ 0.04
PTPN12-201ENST00000248594 CFAP47Q6ZTR5 3102 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 SYNGR3O43761 229 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 MT-CO2P00403 227 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 FGF12P61328 243 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 PAX2Q02962 417 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 TMEM45BQ96B21 275 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 RHBDL1O75783 438 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 TFF1P04155 84 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 RHOGP84095 191 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 TMEM251Q8N6I4 163 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 FGF21Q9NSA1 209 aa15.27■□□□□ 0.04
PTPN12-201ENST00000248594 PEF1Q9UBV8 284 aaKnown RBP15.27■□□□□ 0.04
PTPN12-201ENST00000248594 CXorf1O96002 111 aa15.27■□□□□ 0.03
PTPN12-201ENST00000248594 FOXE3Q13461 319 aa15.27■□□□□ 0.03
PTPN12-201ENST00000248594 AAED1Q7RTV5 226 aa15.27■□□□□ 0.03
PTPN12-201ENST00000248594 TPRX1Q8N7U7 411 aa15.27■□□□□ 0.03
PTPN12-201ENST00000248594 C5orf17Q8NAS9 161 aa15.27■□□□□ 0.03
PTPN12-201ENST00000248594 EML6Q6ZMW3 1958 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 ARR3P36575 388 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 CX3CL1P78423 397 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 ARG2P78540 354 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 C12orf54Q6X4T0 127 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 YRDCQ86U90 279 aaKnown RBP15.26■□□□□ 0.03
PTPN12-201ENST00000248594 ZNF441Q8N8Z8 693 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 MT-ND6P03923 174 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 CRYGSP22914 178 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 CLDN18P56856 261 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 MS4A5Q9H3V2 200 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 LAMA5O15230 3695 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 HLA-DQA1P01909 254 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 NBEAP1P0C6P0 100 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 PRB4P10163 310 aaPredicted RBP15.26■□□□□ 0.03
PTPN12-201ENST00000248594 YPEL5P62699 121 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 FAM27BQ5VT28 67 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 BHLHA15Q7RTS1 189 aaPredicted RBP15.26■□□□□ 0.03
PTPN12-201ENST00000248594 DEFB125Q8N687 156 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 ABI3Q9P2A4 366 aa15.26■□□□□ 0.03
PTPN12-201ENST00000248594 TRAV24A0A0B4J272 114 aa15.25■□□□□ 0.03
PTPN12-201ENST00000248594 VWC2Q2TAL6 325 aa15.25■□□□□ 0.03
PTPN12-201ENST00000248594 PRDM6Q9NQX0 595 aa15.25■□□□□ 0.03
PTPN12-201ENST00000248594 PLCE1Q9P212 2302 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms