RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 CD55P08174 381 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ARL14EPLP0DKL9 152 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 PRB3Q04118 309 aaPredicted RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ZNF596Q8TC21 504 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ZDHHC16Q969W1 377 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 SFRP2Q96HF1 295 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 TICRRQ7Z2Z1 1910 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 TMEM210A6NLX4 147 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 M0R2Z0 102 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 VENTXO95231 258 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ZNF883P0CG24 379 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 GZMBP10144 247 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 NPY1RP25929 384 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ATP5G3P48201 142 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 LYZP61626 148 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 LCN2P80188 198 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 DMRTA1Q5VZB9 504 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 FAM90A2PQ658T7 463 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 TCF23Q7RTU1 214 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ZIC4Q8N9L1 334 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 PLAUP00749 431 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 HINT1P49773 126 aaPredicted RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 LHX2P50458 406 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 HCP5Q6MZN7 132 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 SAXO1Q8IYX7 474 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 C9orf106Q8NAJ2 232 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 OR1B1Q8NGR6 318 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 MBD3L1Q8WWY6 194 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 WDYHV1Q96HA8 205 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 SCNM1Q9BWG6 230 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 QTRT1Q9BXR0 403 aaKnown RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 PGPEP1LA6NFU8 196 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 GABRA6Q16445 453 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 ZCCHC14Q8WYQ9 949 aaKnown RBP7.82□□□□□ -1.16
COL21A1-201ENST00000244728 NABP1Q96AH0 204 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 NPCDR1Q9BY65 106 aa7.82□□□□□ -1.16
COL21A1-201ENST00000244728 CLDN18P56856 261 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
COL21A1-201ENST00000244728 UBE2L3P68036 154 aaKnown RBP7.81□□□□□ -1.16
COL21A1-201ENST00000244728 MMDQ15546 238 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 KRTCAP3Q53RY4 240 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 C2orf88Q9BSF0 95 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 TRAV1-1A0A0B4J248 108 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 SLC17A3O00476 420 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 C1QTNF9P0C862 333 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 IGHV1-2P23083 117 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 ATOH7Q8N100 152 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 REPIN1Q9BWE0 567 aaKnown RBP7.81□□□□□ -1.16
COL21A1-201ENST00000244728 TMEM167BQ9NRX6 74 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 KIF26AQ9ULI4 1882 aaPredicted RBP7.81□□□□□ -1.16
COL21A1-201ENST00000244728 NAPSAO96009 420 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 CEACAM1P13688 526 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 CRYGSP22914 178 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 Q0VFX4 171 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 FXYD3Q14802 87 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 TEPPQ6URK8 271 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 ZNF645Q8N7E2 425 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 LYPD6BQ8NI32 183 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 OR5P3Q8WZ94 311 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 ADTRPQ96IZ2 230 aa7.81□□□□□ -1.16
COL21A1-201ENST00000244728 A0A1W2PN81 502 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 TMEM50AO95807 157 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 ACSF3Q4G176 576 aaPredicted RBP7.8□□□□□ -1.16
COL21A1-201ENST00000244728 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 ABHD12Q8N2K0 398 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 RPP25LQ8N5L8 163 aaKnown RBP7.8□□□□□ -1.16
COL21A1-201ENST00000244728 TECRQ9NZ01 308 aaKnown RBP7.8□□□□□ -1.16
COL21A1-201ENST00000244728 A6NNC1 897 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 EREGO14944 169 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 RAB29O14966 203 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 ARF6P62330 175 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 HIST3H3Q16695 136 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 LYPD6Q86Y78 171 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 PRDM13Q9H4Q3 707 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 ARL16Q0P5N6 197 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 COX19Q49B96 90 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 MMD2Q8IY49 270 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 OR8B3Q8NGG8 313 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 FAM216AQ8WUB2 273 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 OR8B2Q96RD0 313 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 CHRDL1Q9BU40 450 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 NPVFQ9HCQ7 196 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 CALYQ9NYX4 217 aa7.8□□□□□ -1.16
COL21A1-201ENST00000244728 YLPM1P49750 1951 aaKnown RBP7.8□□□□□ -1.16
COL21A1-201ENST00000244728 SETD2Q9BYW2 2564 aaPredicted RBP7.8□□□□□ -1.16
COL21A1-201ENST00000244728 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
COL21A1-201ENST00000244728 IGLV3-32A0A0A0MS00 114 aa7.79□□□□□ -1.16
COL21A1-201ENST00000244728 A0A0G2JRQ6 117 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms