RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RHBDD2Q6NTF9 364 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF716A6NP11 495 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TIMM8AO60220 97 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 SSBP2P81877 361 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TCTEX1D4Q5JR98 221 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 UBE2ZQ9H832 354 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TNFRSF19Q9NS68 423 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TRAV8-4A0A0B4J246 113 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 COX6CP09669 75 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 COX8AP10176 69 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 GDF1P27539 372 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 RHOGP84095 191 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 CCL4L1Q8NHW4 92 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TM4SF19Q96DZ7 209 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 PHF7Q9BWX1 381 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 MBNL3Q9NUK0 354 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 SSTR5P35346 364 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 KIR2DL1P43626 348 aaPredicted RBP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 NABP2Q9BQ15 211 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 MYO16Q9Y6X6 1858 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 A0A1B0GX78 115 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 YPEL1O60688 119 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 ETDBQ3ZM63 59 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 SYT8Q8NBV8 401 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 FER1L6-AS2Q96M78 137 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 YPEL2Q96QA6 119 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 IGHV3-9P01782 118 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 PRNTQ86SH4 94 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 SPACA9Q96E40 222 aaPredicted RBP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 R4GN57 208 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 BRCA1P38398 1863 aaKnown RBP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 IGHV3-43A0A0B4J1X8 118 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 RRHO14718 337 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 IGHV3-43DP0DP04 118 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 PAX1P15863 534 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 RBPMS2Q6ZRY4 209 aaKnown RBP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 MPC1Q9Y5U8 109 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 TMPRSS3P57727 454 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 OR4A5Q8NH83 315 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 PATE1Q8WXA2 126 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
VAMP4-201ENST00000236192 SLC25A2Q9BXI2 301 aa10.88□□□□□ -0.67
VAMP4-201ENST00000236192 SCN8AQ9UQD0 1980 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 CACNG7P62955 275 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 IL36GQ9NZH8 169 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 PRNDQ9UKY0 176 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 NPIPB13A6NJU9 1138 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 NPIPB4C9JG80 1138 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 J3KRW8 73 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 SRD5A2P31213 254 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 SSR4P51571 173 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF718Q3SXZ3 478 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 RAB1CQ92928 201 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 DUSP23Q9BVJ7 150 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 HAPLN4Q86UW8 402 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 ZDHHC16Q969W1 377 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 SPINT1O43278 529 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 DLX1P56177 255 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 HERV-K104P63124 156 aa10.87□□□□□ -0.67
VAMP4-201ENST00000236192 SLC25A10Q9UBX3 287 aaPredicted RBP10.87□□□□□ -0.67
VAMP4-201ENST00000236192 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
VAMP4-201ENST00000236192 PGPA6NDG6 321 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 TMEM8BA6NDV4 472 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 CDCP2Q5VXM1 449 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 INSL6Q9Y581 213 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 hADV38S2A0JD32 116 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 IFITM1P13164 125 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 RFESDQ8TAC1 157 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF721Q8TF20 911 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 WNT16Q9UBV4 365 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 A0A096LPE4 126 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 A0A1W2PPZ6 126 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 H7C2G1 150 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 F2Z2F3 143 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 CSRP1P21291 193 aaKnown RBP10.86□□□□□ -0.67
VAMP4-201ENST00000236192 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
VAMP4-201ENST00000236192 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms