RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PARLQ9H300 379 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 CARHSP1Q9Y2V2 147 aaKnown RBP6.12□□□□□ -1.43
CPS1-201ENST00000233072 EGR4Q05215 589 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 ZIC4Q8N9L1 334 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 NEUROG1Q92886 237 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 PRELID3AQ96N28 172 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 ZNF638Q14966 1978 aaKnown RBP6.12□□□□□ -1.43
CPS1-201ENST00000233072 IGHV2OR16-5A0A0B4J2B6 119 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 NPIPB9F8W1W9 429 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 TRGC2P03986 189 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 MYOD1P15172 320 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 ZNF250P15622 560 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 SPINK2P20155 84 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 MPZP25189 248 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 FAM166AQ6J272 317 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 GTF3AQ92664 365 aaKnown RBP6.12□□□□□ -1.43
CPS1-201ENST00000233072 TNFRSF14Q92956 283 aa6.12□□□□□ -1.43
CPS1-201ENST00000233072 CRYBB3P26998 211 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 CENPWQ5EE01 88 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 RNASE6Q93091 150 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 GDF15Q99988 308 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 A0A1W2PP11 408 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 NPIPB7O75200 414 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 CEACAM4O75871 244 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 DNAL4O96015 105 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 SRIP30626 198 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 C1QTNF9BB2RNN3 333 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 TMEM262E9PQX1 116 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 PEX7O00628 323 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 SIGLEC5O15389 551 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 CCL1P22362 96 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 UCP1P25874 307 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 TGIF1Q15583 401 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 ACSF3Q4G176 576 aaPredicted RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 AKIRIN1Q9H9L7 192 aaPredicted RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 COL4A1P02462 1669 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 BRWD3Q6RI45 1802 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 RBMY1BA6NDE4 496 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 RBMY1EA6NEQ0 496 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 EPOPA6NHQ4 379 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 DUSP14O95147 198 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 RBMY1DP0C7P1 496 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 RBMY1A1P0DJD3 496 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 RBMY1CP0DJD4 496 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 NIT1Q86X76 327 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 PUSL1Q8N0Z8 303 aaKnown RBP6.11□□□□□ -1.43
CPS1-201ENST00000233072 C18orf12Q96KH6 178 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 PLXNA1Q9UIW2 1896 aa6.11□□□□□ -1.43
CPS1-201ENST00000233072 IGLV3-12A0A075B6K2 115 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 LOC102723996A0A087X1L8 192 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 A1L4Q6 167 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 IZUMO1RA6ND01 250 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 ATXN7O15265 892 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 KLK2P20151 261 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 LINC01559Q495D7 138 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 GOLT1AQ6ZVE7 132 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 FAM168AQ92567 244 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 WDYHV1Q96HA8 205 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 CBLN4Q9NTU7 201 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 TRBV20OR9-2A0A075B6H5 130 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 YPEL1O60688 119 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 IGFBP3P17936 291 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 CSRP1P21291 193 aaKnown RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 ARF6P62330 175 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 APCDD1LQ8NCL9 501 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 YPEL2Q96QA6 119 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 FBXL7Q9UJT9 491 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 LY6EQ16553 131 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 TBR1Q16650 682 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 RSPO4Q2I0M5 234 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 NPIPB3Q92617 1050 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 JKAMPQ9P055 326 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 SMCHD1A6NHR9 2005 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 CECR9P0C854 216 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 NUDT10Q8NFP7 164 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 NUDT11Q96G61 164 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 AURKAIP1Q9NWT8 199 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 EIF3GO75821 320 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPS1-201ENST00000233072 EFEMP2O95967 443 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 VDAC2P45880 294 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 OR11H4Q8NGC9 324 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 ZNF414Q96IQ9 312 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 EAF1Q96JC9 268 aaPredicted RBP6.1□□□□□ -1.43
CPS1-201ENST00000233072 C21orf62Q9NYP8 219 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 SEMA5BQ9P283 1151 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 CLDN16Q9Y5I7 305 aa6.1□□□□□ -1.43
CPS1-201ENST00000233072 ANKRD36A6QL64 1941 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 C12orf77C9JDV5 145 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 EFNB1P98172 346 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 YAE1D1Q9NRH1 226 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 FOXI3A8MTJ6 420 aaPredicted RBP6.09□□□□□ -1.43
CPS1-201ENST00000233072 OR11H12B2RN74 326 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 PLAUP00749 431 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 IFITM3Q01628 133 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
CPS1-201ENST00000233072 OR11H2Q8NH07 326 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms