RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 PF4V1P10720 104 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 HLA-DRB5Q30154 266 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 RBM14Q96PK6 669 aaKnown RBP13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 DBX1A6NMT0 343 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 HSBP1L1C9JCN9 74 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 CA2P00918 260 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 DLK1P80370 383 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 P2RX4Q99571 388 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 PAXXQ9BUH6 204 aa13.15□□□□□ -0.3
TMEM30A-201ENST00000230461 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 S100A8P05109 93 aa13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 CTRB1P17538 263 aa13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 LRTM2Q8N967 370 aa13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 RNF126Q9BV68 326 aa13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.31
TMEM30A-201ENST00000230461 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 LY6EQ16553 131 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 C3orf36Q3SXR2 165 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 NOTCH2Q04721 2471 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 C7orf77A4D0Y5 90 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 E7EQL1 145 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 ERVH48-1M5A8F1 160 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 DANCRP0C864 163 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 SUPT4H1P63272 117 aaKnown RBP13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 FAM74A3Q4VXF1 159 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 HEPN1Q6WQI6 88 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 NEUROG1Q92886 237 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 GALR1P47211 349 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 MFAP4P55083 255 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 NPIPB3Q92617 1050 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
TMEM30A-201ENST00000230461 IGF2RP11717 2491 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 EFNA4P52798 201 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 DENND4AQ7Z401 1863 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 H3BQ15 152 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 IGLV1-44P01699 117 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 RAB4AP20338 218 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 S100A4P26447 101 aaKnown RBP13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 COQ2Q96H96 371 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 HELTA6NFD8 242 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 RAMP3O60896 148 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 IGKV1D-33P01593 117 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 IGKV1-33P01594 117 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 PRB3Q04118 309 aaPredicted RBP13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 C7orf69Q9H7B7 122 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 FREM1Q5H8C1 2179 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 H0YIZ8 118 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 IGHV3-48P01763 117 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 ID3Q02535 119 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 Q6ZS49 121 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
TMEM30A-201ENST00000230461 OR10G8Q8NGN5 311 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 PLAUP00749 431 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 MEF2BQ02080 365 aaPredicted RBP13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 GAMTQ14353 236 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 OR5AU1Q8NGC0 362 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 SLX1AQ9BQ83 275 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 DNAJC4Q9NNZ3 241 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 B4DEV8 164 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 F12P00748 615 aaPredicted RBP13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 FHITP49789 147 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
TMEM30A-201ENST00000230461 IGLV3-1P01715 115 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 SAA1P0DJI8 122 aaPredicted RBP13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 Q6ZR03 302 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 ZNF439Q8NDP4 499 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 IGKV3-7A0A075B6H7 116 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 SCGB1D1O95968 90 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 LOXL3P58215 753 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 TGFAP01135 160 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 SLC35B1P78383 322 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 AUP1Q9Y679 476 aa13.11□□□□□ -0.31
TMEM30A-201ENST00000230461 TMEM131Q92545 1883 aa13.1□□□□□ -0.31
TMEM30A-201ENST00000230461 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
TMEM30A-201ENST00000230461 UPK2O00526 184 aa13.1□□□□□ -0.31
TMEM30A-201ENST00000230461 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
TMEM30A-201ENST00000230461 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
TMEM30A-201ENST00000230461 SSX7Q7RTT5 188 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms