RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 SFXN3Q9BWM7 321 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 V9GYV3 84 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 A8MXE2 369 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 BRWD1-AS2P59051 145 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 STUMQ69YW2 141 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 LINC00596Q86U02 117 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 BORCS7Q96B45 105 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 SPOCK3Q9BQ16 436 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 CST9LQ9H4G1 147 aa11.71□□□□□ -0.54
SF1-201ENST00000227503 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.54
SF1-201ENST00000227503 C17orf112F2Z3M2 114 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.7□□□□□ -0.54
SF1-201ENST00000227503 ACTL6BO94805 426 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 CD1BP29016 333 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 PMCHL1Q16048 86 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 TMEM105Q8N8V8 129 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 ARFGEF3Q5TH69 2177 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 C15orf62A8K5M9 175 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 ACP1P24666 158 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 OR52L2PQ8NGH6 319 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
SF1-201ENST00000227503 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
SF1-201ENST00000227503 FAM234AQ9H0X4 552 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 SERTAD4Q9NUC0 356 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 TNCP24821 2201 aa11.7□□□□□ -0.54
SF1-201ENST00000227503 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 IGHV3-43A0A0B4J1X8 118 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
SF1-201ENST00000227503 IGHV3-43DP0DP04 118 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 ARR3P36575 388 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 MAGEA5P43359 124 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 MCRIP2Q9BUT9 160 aaKnown RBP11.69□□□□□ -0.54
SF1-201ENST00000227503 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
SF1-201ENST00000227503 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 DYSFO75923 2080 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 CELA3BP08861 270 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 GPR6P46095 362 aaPredicted RBP11.69□□□□□ -0.54
SF1-201ENST00000227503 SLAQ13239 276 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 TNXAQ16473 311 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 OCIAD2Q56VL3 154 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 CGAP01215 116 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 MGST2Q99735 147 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
SF1-201ENST00000227503 A0A1W2PN81 502 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 ZNF891A8MT65 544 aaPredicted RBP11.68□□□□□ -0.54
SF1-201ENST00000227503 LTC4SQ16873 150 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 PDLIM3Q53GG5 364 aaPredicted RBP11.68□□□□□ -0.54
SF1-201ENST00000227503 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
SF1-201ENST00000227503 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 MPC1Q9Y5U8 109 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 OR5B21A6NL26 309 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 ANKRD30BLA7E2S9 258 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 IGHV3-7P01780 117 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 CRYBB3P26998 211 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 SELENOVP59797 346 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 GNG3P63215 75 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 ZNF718Q3SXZ3 478 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 H2BFWTQ7Z2G1 175 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 WFDC8Q8IUA0 241 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 TPRX1Q8N7U7 411 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
SF1-201ENST00000227503 FAM90A26D6RGX4 464 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 LAMTOR5O43504 91 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 OR2H2O95918 312 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 MGST1P10620 155 aaKnown RBP11.67□□□□□ -0.54
SF1-201ENST00000227503 Q6P435 159 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
SF1-201ENST00000227503 ZPBPQ9BS86 351 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 GNB1LQ9BYB4 327 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
SF1-201ENST00000227503 IGHV1-69-2A0A0G2JMI3 117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms