RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 NMES1Q9C002 83 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 IGHV7-81A0A0B4J1V7 117 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 C13orf42A0A1B0GVH6 325 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 C5orf51A6NDU8 294 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 E7EUB6 86 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 GPR137BO60478 399 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 CA2P00918 260 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 HSPE1P61604 102 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 PLGLAQ15195 96 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 THOC7Q6I9Y2 204 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 WDR89Q96FK6 387 aaPredicted RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 ZNF436Q9C0F3 470 aaPredicted RBP11.12□□□□□ -0.63
SEC61B-201ENST00000223641 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
SEC61B-201ENST00000223641 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 IGHG2P01859 326 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 MYOD1P15172 320 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 OR2B8PP59922 312 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 BLCAPP62952 87 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 CX3CL1P78423 397 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
SEC61B-201ENST00000223641 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 FYTTD1Q96QD9 318 aaKnown RBP11.11□□□□□ -0.63
SEC61B-201ENST00000223641 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 HSPB9Q9BQS6 159 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 NDUFA4L2Q9NRX3 87 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
SEC61B-201ENST00000223641 A0A1B0GW64 132 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 GIPP09681 153 aaPredicted RBP11.1□□□□□ -0.63
SEC61B-201ENST00000223641 SPCS3P61009 180 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
SEC61B-201ENST00000223641 TNFRSF9Q07011 255 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 TNXAQ16473 311 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 PDCD10Q9BUL8 212 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 GSKIPQ9P0R6 139 aa11.1□□□□□ -0.63
SEC61B-201ENST00000223641 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 TCF21O43680 179 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 ACTL6BO94805 426 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 MBPP02686 304 aaPredicted RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 NKX2-1P43699 371 aaPredicted RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 CRIP2P52943 208 aaPredicted RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 RAP2BP61225 183 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 NDPQ00604 133 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 FXYD3Q14802 87 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 C10orf55Q5SWW7 151 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 Q6ZS46 218 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 Q8N2B8 174 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 SRSF12Q8WXF0 261 aaKnown RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
SEC61B-201ENST00000223641 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
SEC61B-201ENST00000223641 NF1P21359 2839 aa11.08□□□□□ -0.63
SEC61B-201ENST00000223641 FAM181BA6NEQ2 426 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 SH2D7A6NKC9 451 aaPredicted RBP11.08□□□□□ -0.64
SEC61B-201ENST00000223641 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 IGF1P05019 195 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 RAB32Q13637 225 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 PPP1R1CQ8WVI7 109 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 ARPC1AQ92747 370 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 NPFFR1Q9GZQ6 430 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 C11orf1Q9H5F2 150 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 ZFP57Q9NU63 452 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 FBXO7Q9Y3I1 522 aa11.08□□□□□ -0.64
SEC61B-201ENST00000223641 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
SEC61B-201ENST00000223641 G3V3Q6 166 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 TRIM77I1YAP6 450 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 K7EPK0 472 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 KCNAB3O43448 404 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 SYNGR2O43760 224 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 TSPAN9O75954 239 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 CNIH1O95406 144 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 IFNA17P01571 189 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 OPN1MWP04001 364 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 OPN1MW2P0DN77 364 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 OPN1MW3P0DN78 364 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 PSMB6P28072 239 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms