RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 IGHV1-69-2A0A0G2JMI3 117 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TEX38Q6PEX7 206 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 LOC101059948A0A1B0GTJ6 334 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 PATE3B3GLJ2 98 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TSPOP30536 169 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 MDP1Q86V88 176 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 TNFRSF19Q9NS68 423 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 COL24A1Q17RW2 1714 aa8.89□□□□□ -0.99
VCL-201ENST00000211998 OR2H2O95918 312 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 REG1BP48304 166 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 DLX6P56179 175 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 FAM27BQ5VT28 67 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 OR51G1Q8NGK1 321 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 MRPL32Q9BYC8 188 aaKnown RBP8.88□□□□□ -0.99
VCL-201ENST00000211998 F5P12259 2224 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 DLEC1Q9Y238 1755 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 HTN1P15515 57 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 RND2P52198 227 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 ZXDCQ2QGD7 858 aaPredicted RBP8.88□□□□□ -0.99
VCL-201ENST00000211998 ZNF714Q96N38 554 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 SFXN3Q9BWM7 321 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 HS3ST3B1Q9Y662 390 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 LHFPL6Q9Y693 200 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 CCL21O00585 134 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 CD33P20138 364 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 HSPE1P61604 102 aaKnown RBP8.88□□□□□ -0.99
VCL-201ENST00000211998 ACTL10Q5JWF8 245 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 SMCHD1A6NHR9 2005 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 A8MWV9 139 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 HOXA3O43365 443 aaPredicted RBP8.88□□□□□ -0.99
VCL-201ENST00000211998 THY1P04216 161 aa8.88□□□□□ -0.99
VCL-201ENST00000211998 IGHV3OR15-7A0A075B7D8 119 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 DNAL4O96015 105 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 CRIM1Q9NZV1 1036 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 ZNFX1Q9P2E3 1918 aaKnown RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 MYO7AQ13402 2215 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 IFNL4K9M1U5 179 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 ATP5LO75964 103 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 NDUFA3O95167 84 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 SPINK8P0C7L1 97 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 MPZP25189 248 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 TMEM78Q5T7P6 136 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 FGF11Q92914 225 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 IGHV1-45A0A0A0MS14 117 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 A0A1B0GW64 132 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 RPL8P62917 257 aaKnown RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 PSG4Q00888 419 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 HCP5Q6MZN7 132 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 FAM53AQ6NSI3 398 aaPredicted RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 DLL3Q9NYJ7 618 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 TCF19Q9Y242 345 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 A0A087X0K7 114 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 GREM1O60565 184 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 EIF4EBP2Q13542 120 aaPredicted RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 C1QL2Q7Z5L3 287 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 C18orf12Q96KH6 178 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 SLC25A10Q9UBX3 287 aaPredicted RBP8.87□□□□□ -0.99
VCL-201ENST00000211998 QSER1Q2KHR3 1735 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 GAGE1Q13065 139 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 STPG1Q5TH74 334 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 DRAM1Q8N682 238 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
VCL-201ENST00000211998 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 A0A0G2JMM0 328 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 A0A1W2PPB8 328 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 C17orf51A8MQB3 221 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 KIR3DP1A8MWS1 328 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 AHRRA9YTQ3 701 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 NAPSAO96009 420 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 UCP1P25874 307 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 FADS6Q8N9I5 356 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 OCC1Q8TAD7 63 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 RSPO3Q9BXY4 272 aaPredicted RBP8.86□□□□□ -0.99
VCL-201ENST00000211998 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 IGHV4-39P01824 125 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 MUC21Q5SSG8 566 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 LCN12Q6JVE5 192 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 VKORC1L1Q8N0U8 176 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 DMRTA2Q96SC8 542 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 IGKV1D-42A0A075B6H8 117 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 PEX7O00628 323 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 SLC25A47Q6Q0C1 308 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 FAM214BQ7L5A3 538 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 PILRAQ9UKJ1 303 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms