RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PPP1R1CQ8WVI7 109 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 ASCL2Q99929 193 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 SLC25A37Q9NYZ2 338 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 HLA-DRB1P01911 266 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 HBDP02042 147 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 SCAND1P57086 179 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 PAX8Q06710 450 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 P2RY4P51582 365 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 C1orf53Q5VUE5 145 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 WDR34Q96EX3 536 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 RCHY1Q96PM5 261 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 TRAV24A0A0B4J272 114 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 A0A1W2PPE3 182 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 TMEM178BH3BS89 294 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 SMIM13P0DJ93 91 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 HIST1H4AP62805 103 aaKnown RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 C2orf68Q2NKX9 166 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 ZNF48Q96MX3 618 aaPredicted RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 FRMPD3Q5JV73 1810 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 FHITP49789 147 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 RUNX1Q01196 453 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 ERCC8Q13216 396 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 CCSMST1Q4G0I0 132 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 PGLYRP3Q96LB9 341 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 A0A0U1RQS6 177 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 F12P00748 615 aaPredicted RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 SLAQ13239 276 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 FAM90A2PQ658T7 463 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 RFLNAQ6ZTI6 216 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 PLXNA1Q9UIW2 1896 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 PLPP2O43688 288 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 TMEM92Q6UXU6 159 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 GLDNQ6ZMI3 551 aaPredicted RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 ST6GALNAC2Q9UJ37 374 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 LOC390937A0A1W2PQ73 354 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 CLPSL1A2RUU4 121 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 HMGN4O00479 90 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 CT83Q5H943 113 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 C15orf61A6NNL5 157 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 MMP23AO75900 390 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 MGAMO43451 1857 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 GPX2P18283 190 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 IL11P20809 199 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 FOXA1P55317 472 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 Q8NFD4 153 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 SCARF2Q96GP6 870 aaPredicted RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 WDR90Q96KV7 1748 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.95□□□□□ -1.94
NEB-201ENST00000172853 SPINK2P20155 84 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 HCSTQ9UBK5 93 aa2.95□□□□□ -1.94
NEB-201ENST00000172853 LRRC37A3O60309 1634 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 GPR183P32249 361 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 CCL18P55774 89 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 GTF3AQ92664 365 aaKnown RBP2.94□□□□□ -1.94
NEB-201ENST00000172853 SCTP09683 121 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 FAM216AQ8WUB2 273 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 ORAOV1Q8WV07 137 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 PGLYRP4Q96LB8 373 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 CELA3AP09093 270 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 GNLYP22749 145 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 MBNL3Q9NUK0 354 aaKnown RBP2.94□□□□□ -1.94
NEB-201ENST00000172853 FOXA2Q9Y261 457 aaPredicted RBP2.94□□□□□ -1.94
NEB-201ENST00000172853 IGHV1-45A0A0A0MS14 117 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 IGHV3-66A0A0C4DH42 116 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 C1orf220Q5T0J3 134 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 ST6GAL2Q96JF0 529 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 CCL28Q9NRJ3 127 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 RREB1Q92766 1687 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 NDUFB1O75438 58 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 HSPE1P61604 102 aaKnown RBP2.94□□□□□ -1.94
NEB-201ENST00000172853 IRF3Q14653 427 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 ZNF831Q5JPB2 1677 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 KCNE1BA0A087WTH5 132 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 FABP5P3A8MUU1 101 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 TMEM50BP56557 158 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 OR1P1Q8NH06 330 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 ZNF479Q96JC4 524 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 PKIBQ9C010 78 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 RNF167Q9H6Y7 350 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 MRPS18BQ9Y676 258 aaKnown RBP2.94□□□□□ -1.94
NEB-201ENST00000172853 PATE3B3GLJ2 98 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 IGHV3-11P01762 117 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 C8orf88P0DMB2 117 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 ZNF506Q5JVG8 444 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 KLHL30-AS1Q8NEE0 82 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 C17orf47Q8NEP4 570 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 MRGPRFQ96AM1 343 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 DOCK5Q9H7D0 1870 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 A0A1B0GW15 77 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 IGHV3-23P01764 117 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 C1QAP02745 245 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 PLA2G5P39877 138 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 MGST2Q99735 147 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 DAPP51397 102 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 TM2D2Q9BX73 214 aa2.94□□□□□ -1.94
NEB-201ENST00000172853 NDUFS8O00217 210 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms