RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZDHHC16Q969W1 377 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 NAV2Q8IVL1 2488 aa15.95■□□□□ 0.14
TNFRSF1A-201ENST00000162749 TAS2R30P59541 319 aa15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 FAM213BQ8TBF2 198 aa15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PSENENQ9NZ42 101 aa15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 ENSAO43768 121 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PRTN3P24158 256 aa15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OSR1Q8TAX0 266 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PCGF1Q9BSM1 259 aa15.94■□□□□ 0.14
TNFRSF1A-201ENST00000162749 COL8A1P27658 744 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PPT1P50897 306 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 RUNX1Q01196 453 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 C1orf122Q6ZSJ8 110 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 C10orf105Q8TEF2 133 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PIMREGQ9BSJ6 248 aa15.93■□□□□ 0.14
TNFRSF1A-201ENST00000162749 TMEM267Q0VDI3 215 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 TMEM177Q53S58 311 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SPINK9Q5DT21 86 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 ZNF429Q86V71 674 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 STX12Q86Y82 276 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PDPNQ86YL7 162 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 LINC00518Q8N0U6 118 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 KIR3DL3Q8N743 410 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR11H6Q8NGC7 330 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 DTD1Q8TEA8 209 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 HARBI1Q96MB7 349 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 ATP5SQ99766 215 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 NAV3Q8IVL0 2385 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 C15orf61A6NNL5 157 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 IL6RP08887 468 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SULT1A1P50225 295 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR4C13Q8NGP0 309 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 LHX4Q969G2 390 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 FLYWCH2Q96CP2 140 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PERPQ96FX8 193 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 WASHC3Q9Y3C0 194 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 CSMD1Q96PZ7 3565 aa15.92■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■□□ 16.3
TNFRSF1A-201ENST00000162749 A0A1B0GV50 99 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 NDUFS8O00217 210 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 IFNA17P01571 189 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 KLRD1Q13241 179 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PEA15Q15121 130 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SPANXN5Q5MJ07 72 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 LDLRAD2Q5SZI1 272 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 HCP5Q6MZN7 132 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 UNKLQ9H9P5 680 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 AMMECR1Q9Y4X0 333 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 KPTNQ9Y664 436 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 IGHV2-70DA0A0C4DH43 119 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 VWC2LB2RUY7 222 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 UMAD1C9J7I0 102 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 METTL15P1P0C7V9 234 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SAA1P0DJI8 122 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PLA2G2AP14555 144 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 PDLIM3Q53GG5 364 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 CLEC2AQ6UVW9 174 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 OR52E5Q8NH55 327 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 EIF5A2Q9GZV4 153 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 TMEM14BQ9NUH8 114 aa15.91■□□□□ 0.14
TNFRSF1A-201ENST00000162749 CEBPZOSA8MTT3 80 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 LY6LH3BQJ8 138 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 RAB13P51153 203 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SPCS3P61009 180 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 CCL20P78556 96 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 SPSB3Q6PJ21 355 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 VMO1Q7Z5L0 202 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 GNPNAT1Q96EK6 184 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 IGHV1-3A0A0C4DH29 117 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 ARG1P05089 322 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 MC5RP33032 325 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 ARL16Q0P5N6 197 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 TMEM14EPQ6UXP3 125 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 RPEQ96AT9 228 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 CIB3Q96Q77 187 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 BET1LQ9NYM9 111 aa15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 FOXA2Q9Y261 457 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-201ENST00000162749 GCN1Q92616 2671 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ZANQ9Y493 2812 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 IGHV3-72A0A0B4J1Y9 119 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 IGHV4-61A0A0C4DH41 118 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ODF3BA8MYP8 253 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 PAX1P15863 534 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ZNF787Q6DD87 383 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ETV3LQ6ZN32 361 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HAPLN4Q86UW8 402 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 SIRPDQ9H106 197 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 FBXO7Q9Y3I1 522 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ZFHX3Q15911 3703 aa15.89■□□□□ 0.13
TNFRSF1A-201ENST00000162749 IGHV4-30-2A0A087WSY4 118 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 OR4C12Q96R67 309 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 FOXH1O75593 365 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HTR1DP28221 377 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 B2MP61769 119 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 LFNGQ8NES3 379 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 TCF19Q9Y242 345 aa15.88■□□□□ 0.13
TNFRSF1A-201ENST00000162749 A0A1B0GW64 132 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 UPK2O00526 184 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 DFFBO76075 338 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms