RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
CTNS-201ENST00000046640 TMEM256Q8N2U0 113 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 FAM216BQ8N7L0 139 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 Q8TCH9 128 aa10.85□□□□□ -0.67
CTNS-201ENST00000046640 HSD17B10Q99714 261 aaKnown RBP10.85□□□□□ -0.67
CTNS-201ENST00000046640 G0S2P27469 103 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 TNFAIP6P98066 277 aaPredicted RBP10.84□□□□□ -0.67
CTNS-201ENST00000046640 TMEM68Q96MH6 324 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 DVL1O14640 695 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 EREGO14944 169 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 ADH4P08319 380 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 MYOD1P15172 320 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 IGFL3Q6UXB1 125 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 FAM90A1Q86YD7 464 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 CUL9Q8IWT3 2517 aa10.84□□□□□ -0.67
CTNS-201ENST00000046640 A0A1W2PPV4 95 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 RAB29O14966 203 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 NUPR1O60356 82 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 LOXL3P58215 753 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
CTNS-201ENST00000046640 GNB1P62873 340 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 ABHD12Q8N2K0 398 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 RBM14Q96PK6 669 aaKnown RBP10.83□□□□□ -0.68
CTNS-201ENST00000046640 NDUFAF3Q9BU61 184 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 PMS2P5A8MQ11 134 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 MMP23AO75900 390 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 IGHV1-46P01743 117 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 IL3RAP26951 378 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 HTD2P86397 168 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 MZT1Q08AG7 82 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 OR4A16Q8NH70 328 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 TMEM170AQ8WVE7 144 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 TNCP24821 2201 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 A8MXE2 369 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 LYG1Q8N1E2 194 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 PPP1R35Q8TAP8 253 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 SSMEM1Q8WWF3 244 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 IMMP2LQ96T52 175 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
CTNS-201ENST00000046640 TUBG2Q9NRH3 451 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 OR6C3Q9NZP0 311 aa10.83□□□□□ -0.68
CTNS-201ENST00000046640 TACC2O95359 2948 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 RRHO14718 337 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 CD40P25942 277 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 CT45A1Q5HYN5 189 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 CT45A3Q8NHU0 189 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 TMEM18Q96B42 140 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 S1PR3Q99500 378 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 PYGO2Q9BRQ0 406 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 MANBALQ9NQG1 85 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 ZNF705FA8MVS1 300 aaPredicted RBP10.82□□□□□ -0.68
CTNS-201ENST00000046640 ZNF705DP0CH99 300 aaPredicted RBP10.82□□□□□ -0.68
CTNS-201ENST00000046640 ZNF705BP0CI00 300 aaPredicted RBP10.82□□□□□ -0.68
CTNS-201ENST00000046640 CCKARP32238 428 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 CNN1P51911 297 aaKnown RBP10.82□□□□□ -0.68
CTNS-201ENST00000046640 SELENOVP59797 346 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 PAX5Q02548 391 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 PRR30Q53SZ7 412 aaPredicted RBP10.82□□□□□ -0.68
CTNS-201ENST00000046640 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 SGMS2Q8NHU3 365 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 TIMM9Q9Y5J7 89 aa10.82□□□□□ -0.68
CTNS-201ENST00000046640 A0A0G2JNJ9 132 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 TMPRSS2O15393 492 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 MBP02144 154 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 CRYABP02511 175 aaKnown RBP10.81□□□□□ -0.68
CTNS-201ENST00000046640 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 KCNIP4Q6PIL6 250 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 IGF2-ASQ6U949 168 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 NOL4LQ96MY1 436 aaPredicted RBP10.81□□□□□ -0.68
CTNS-201ENST00000046640 RNF7Q9UBF6 113 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 Q9UFV3 132 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 IGF2RP11717 2491 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 SPINK4O60575 86 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 LHBP01229 141 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 CD1BP29016 333 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 TIMP3P35625 211 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 RAB4BP61018 213 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 ACOT6Q3I5F7 207 aaPredicted RBP10.81□□□□□ -0.68
CTNS-201ENST00000046640 TEX38Q6PEX7 206 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 DOLPP1Q86YN1 238 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 FAM57AQ8TBR7 257 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 JPT1Q9UK76 154 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 TET2Q6N021 2002 aaPredicted RBP10.81□□□□□ -0.68
CTNS-201ENST00000046640 LRBAP50851 2863 aa10.81□□□□□ -0.68
CTNS-201ENST00000046640 SAA2-SAA4A0A096LPE2 208 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 C17orf112F2Z3M2 114 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms