RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FNDC10F2Z333 226 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 RRHO14718 337 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 MPDU1O75352 247 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 MBP02144 154 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 USF1P22415 310 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 LGALS7P47929 136 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 MALRD1Q5VYJ5 2156 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 TEX50A0A1B0GTY4 177 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 OVOL3O00110 214 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 FGF7P21781 194 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 NPY1RP25929 384 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 CD1BP29016 333 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 GPR6P46095 362 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 CCL20P78556 96 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 DEFA5Q01523 94 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 MS4A7Q9GZW8 240 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 PLEKHA3Q9HB20 300 aa11.59□□□□□ -0.55
RTFDC1-201ENST00000023939 LOC105371242A0A075B767 164 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 C17orf112F2Z3M2 114 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 LY6LH3BQJ8 138 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 CDKN1AP38936 164 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 RPS16P62249 146 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 Q8N7P7 452 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 OR11H6Q8NGC7 330 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 OR4P4Q8NGL7 312 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 SFT2D1Q8WV19 159 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
RTFDC1-201ENST00000023939 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 VMA21Q3ZAQ7 101 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 VSIRQ9H7M9 311 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 NDUFA4L2Q9NRX3 87 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 DOCK11Q5JSL3 2073 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 CA2P00918 260 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 PRTN3P24158 256 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 GUCA2BQ16661 112 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 C2orf83Q53S99 150 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 ACSM6Q6P461 480 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 TEX45Q8NA69 505 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 NKX6-2Q9C056 277 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 COMMD5Q9GZQ3 224 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 UNKLQ9H9P5 680 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
RTFDC1-201ENST00000023939 IGHV1-3A0A0C4DH29 117 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 SNAPINO95295 136 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 IFNA4P05014 189 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 MYOD1P15172 320 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 RNF5Q99942 180 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 LSM4Q9Y4Z0 139 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 SPTBN1Q01082 2364 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-201ENST00000023939 A0A1W2PN81 502 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 NDUFS7O75251 213 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 IGKV1D-33P01593 117 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 IGKV1-33P01594 117 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 CRYGBP07316 175 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 COX7A1P24310 79 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 CHRNA7P36544 502 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 PPT1P50897 306 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 BTN1A1Q13410 526 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 PNKDQ8N490 385 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 INSIG2Q9Y5U4 225 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 KLF2Q9Y5W3 355 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 OPRK1P41145 380 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 ELLP55199 621 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 FFAR4Q5NUL3 377 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 ZNF787Q6DD87 383 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 SUN5Q8TC36 379 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 RPEQ96AT9 228 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 SPOCK3Q9BQ16 436 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 ZNF430Q9H8G1 570 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 KCNIP2Q9NS61 270 aa11.55□□□□□ -0.56
RTFDC1-201ENST00000023939 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms