RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
USH1C-201ENST00000005226 EFNB3Q15768 340 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 FAM201AQ5SY85 155 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 VWA1Q6PCB0 445 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 ARRDC1-AS1Q9H2J1 176 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 TCF19Q9Y242 345 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 COL27A1Q8IZC6 1860 aaPredicted RBP11.58□□□□□ -0.55
USH1C-201ENST00000005226 IRF2P14316 349 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 RAB4AP20338 218 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 MIR17HGQ75NE6 70 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.56
USH1C-201ENST00000005226 ARFGEF3Q5TH69 2177 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 YPEL1O60688 119 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 CD46P15529 392 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 IGFBP2P18065 325 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 TCL1AP56279 114 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 FXYD3Q14802 87 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 WDR31Q8NA23 367 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 YPEL2Q96QA6 119 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 ZPBPQ9BS86 351 aa11.58□□□□□ -0.56
USH1C-201ENST00000005226 IGKV1D-17A0A075B6S4 117 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 CECR9P0C854 216 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 SMIM21Q3B7S5 101 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 DOLPP1Q86YN1 238 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 ST6GALNAC3Q8NDV1 305 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 TECTAO75443 2155 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 ERVK-16P61578 105 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 MLANAQ16655 118 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 TPTE2P1Q5T6R2 138 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 FAM216AQ8WUB2 273 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 GMPPAQ96IJ6 420 aaPredicted RBP11.57□□□□□ -0.56
USH1C-201ENST00000005226 S1PR3Q99500 378 aa11.57□□□□□ -0.56
USH1C-201ENST00000005226 RNASE7Q9H1E1 156 aaKnown RBP11.57□□□□□ -0.56
USH1C-201ENST00000005226 CRYBB3P26998 211 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 TPPP2P59282 170 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 DHRS13Q6UX07 377 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 C1orf210Q8IVY1 113 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 MMD2Q8IY49 270 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 TCTEX1D1Q8N7M0 179 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 SAMD10Q9BYL1 202 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 SMG1Q96Q15 3661 aaKnown RBP11.56□□□□□ -0.56
USH1C-201ENST00000005226 CA2P00918 260 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 MSMPQ1L6U9 139 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 TMEM164Q5U3C3 297 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 INO80CQ6PI98 192 aaPredicted RBP11.56□□□□□ -0.56
USH1C-201ENST00000005226 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
USH1C-201ENST00000005226 LRFN3Q9BTN0 628 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
USH1C-201ENST00000005226 RP1L1Q8IWN7 2480 aaPredicted RBP11.55□□□□□ -0.56
USH1C-201ENST00000005226 MPDU1O75352 247 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 ADH4P08319 380 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 LGALS4P56470 323 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 RPP30P78346 268 aaKnown RBP11.55□□□□□ -0.56
USH1C-201ENST00000005226 HTD2P86397 168 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 TMEM249Q2WGJ8 235 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
USH1C-201ENST00000005226 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 UBALD2Q8IYN6 164 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
USH1C-201ENST00000005226 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 J3QW42 95 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 TNFSF15O95150 251 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 KRTDAPP60985 99 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 SELENOTP62341 195 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 PSG5Q15238 335 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 PQLC2Q6ZP29 291 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
USH1C-201ENST00000005226 OR10J4P0C629 311 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 LOXL3P58215 753 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 PRR31Q5SQ13 230 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 INTS1Q8N201 2190 aaKnown RBP11.54□□□□□ -0.56
USH1C-201ENST00000005226 C21orf140B9A014 251 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 NPY1RP25929 384 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 TFPI2P48307 235 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 RHOBP62745 196 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 CENPWQ5EE01 88 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 Q6ZT83 130 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 OR5AU1Q8NGC0 362 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 V9GYV3 84 aa11.54□□□□□ -0.56
USH1C-201ENST00000005226 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 NPSP0C0P6 89 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 HOXC12P31275 282 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 KIR2DL2P43627 348 aaPredicted RBP11.53□□□□□ -0.56
USH1C-201ENST00000005226 SRSF6Q13247 344 aaKnown RBP11.53□□□□□ -0.56
USH1C-201ENST00000005226 RPEL1Q2QD12 228 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms